Literature DB >> 20593436

The alpha/beta-hydrolase fold 3DM database (ABHDB) as a tool for protein engineering.

Robert Kourist1, Helge Jochens, Sebastian Bartsch, Remko Kuipers, Santosh Kumar Padhi, Markus Gall, Dominique Böttcher, Henk-Jan Joosten, Uwe T Bornscheuer.   

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Year:  2010        PMID： 20593436     DOI： 10.1002/cbic.201000213

Source DB:  PubMed          Journal:  Chembiochem        ISSN： 1439-4227            Impact factor:   3.164


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  36 in total

1.  Combinatorial reshaping of the Candida antarctica lipase A substrate pocket for enantioselectivity using an extremely condensed library.

Authors:  Anders G Sandström; Ylva Wikmark; Karin Engström; Jonas Nyhlén; Jan-E Bäckvall
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-16       Impact factor: 11.205

2.  Evolution of a Catalytic Mechanism.

Authors:  Alissa Rauwerdink; Mark Lunzer; Titu Devamani; Bryan Jones; Joanna Mooney; Zhi-Jun Zhang; Jian-He Xu; Romas J Kazlauskas; Antony M Dean
Journal:  Mol Biol Evol       Date:  2015-12-16       Impact factor: 16.240

3.  Comparison of Five Protein Engineering Strategies for Stabilizing an α/β-Hydrolase.

Authors:  Bryan J Jones; Huey Yee Lim; Jun Huang; Romas J Kazlauskas
Journal:  Biochemistry       Date:  2017-11-14       Impact factor: 3.162

4.  Large scale structural rearrangement of a serine hydrolase from Francisella tularensis facilitates catalysis.

Authors:  Ekaterina V Filippova; Leigh A Weston; Misty L Kuhn; Brett Geissler; Alexandra M Gehring; Nicola Armoush; Chinessa T Adkins; George Minasov; Ievgeniia Dubrovska; Ludmilla Shuvalova; James R Winsor; Luke D Lavis; Karla J F Satchell; Daniel P Becker; Wayne F Anderson; R Jeremy Johnson
Journal:  J Biol Chem       Date:  2013-02-19       Impact factor: 5.157

5.  Design of an allosterically regulated retroaldolase.

Authors:  Elizabeth A Raymond; Korrie L Mack; Jennifer H Yoon; Olesia V Moroz; Yurii S Moroz; Ivan V Korendovych
Journal:  Protein Sci       Date:  2015-01-13       Impact factor: 6.725

6.  Fluorogenic structure activity library pinpoints molecular variations in substrate specificity of structurally homologous esterases.

Authors:  Alex White; Andrew Koelper; Arielle Russell; Erik M Larsen; Charles Kim; Luke D Lavis; Geoffrey C Hoops; R Jeremy Johnson
Journal:  J Biol Chem       Date:  2018-07-13       Impact factor: 5.157

7.  pocketZebra: a web-server for automated selection and classification of subfamily-specific binding sites by bioinformatic analysis of diverse protein families.

Authors:  Dmitry Suplatov; Eugeny Kirilin; Mikhail Arbatsky; Vakil Takhaveev; Vytas Svedas
Journal:  Nucleic Acids Res       Date:  2014-05-22       Impact factor: 16.971

8.  Uncovering divergent evolution of α/β-hydrolases: a surprising residue substitution needed to convert Hevea brasiliensis hydroxynitrile lyase into an esterase.

Authors:  David M Nedrud; Hui Lin; Gilsinia Lopez; Santosh K Padhi; Graig A Legatt; Romas J Kaz-Lauskas
Journal:  Chem Sci       Date:  2014-11       Impact factor: 9.825

9.  Active-site inhibitors modulate the dynamic properties of human monoacylglycerol lipase: a hydrogen exchange mass spectrometry study.

Authors:  Ioannis Karageorgos; Thomas E Wales; David R Janero; Nikolai Zvonok; V Kiran Vemuri; John R Engen; Alexandros Makriyannis
Journal:  Biochemistry       Date:  2013-07-08       Impact factor: 3.162

10.  Catalytic Promiscuity of Ancestral Esterases and Hydroxynitrile Lyases.

Authors:  Titu Devamani; Alissa M Rauwerdink; Mark Lunzer; Bryan J Jones; Joanna L Mooney; Maxilmilien Alaric O Tan; Zhi-Jun Zhang; Jian-He Xu; Antony M Dean; Romas J Kazlauskas
Journal:  J Am Chem Soc       Date:  2016-01-15       Impact factor: 15.419
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