Literature DB >> 20592161

Minireview: Switching on progesterone receptor expression with duplex RNA.

Bethany A Janowski1, David R Corey.   

Abstract

It has long been appreciated that gene expression is regulated by protein complexes at promoters. More recently, research has demonstrated that small duplex RNAs such as micro-RNAs and short interfering RNAs complementary to mRNA provide another layer of regulation. Evidence now supports the existence of regulatory pathways that use small duplex RNAs to control transcription. Synthetic RNAs complementary to gene promoters [antigene RNAs (agRNAs)] can either activate or inhibit gene expression. Activity of agRNAs is mediated by argonaute, a protein required for RNA interference. Unlike protein transcription factors, agRNAs do not bind to chromosomal DNA but recognize noncoding transcripts that overlap gene promoters or 3'-gene termini. This review describes recent studies with agRNAs and focuses on the robust and potent agRNA-mediated regulation of progesterone receptor. The ability of small RNAs to alter transcription provides a new layer of potential regulation for gene expression.

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Year:  2010        PMID: 20592161      PMCID: PMC2999478          DOI: 10.1210/me.2010-0067

Source DB:  PubMed          Journal:  Mol Endocrinol        ISSN: 0888-8809


  71 in total

1.  Induction of DNA methylation and gene silencing by short interfering RNAs in human cells.

Authors:  Kazunari Taira
Journal:  Nature       Date:  2006-06-29       Impact factor: 49.962

Review 2.  Transcription and RNA interference in the formation of heterochromatin.

Authors:  Shiv I S Grewal; Sarah C R Elgin
Journal:  Nature       Date:  2007-05-24       Impact factor: 49.962

3.  Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells.

Authors:  Jiang Han; Daniel Kim; Kevin V Morris
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-17       Impact factor: 11.205

4.  Higher order chromatin structure at the X-inactivation center via looping DNA.

Authors:  Chia-Lun Tsai; Rebecca K Rowntree; Dena E Cohen; Jeannie T Lee
Journal:  Dev Biol       Date:  2008-04-18       Impact factor: 3.582

5.  Regulation of estrogen receptor-alpha gene expression by epidermal growth factor.

Authors:  A Stoica; M Saceda; V L Doraiswamy; C Coleman; M B Martin
Journal:  J Endocrinol       Date:  2000-05       Impact factor: 4.286

Review 6.  The RNA coregulator SRA, its binding proteins and nuclear receptor signaling activity.

Authors:  Shane M Colley; Kavitha R Iyer; Peter J Leedman
Journal:  IUBMB Life       Date:  2008-03       Impact factor: 3.885

7.  RNAi components are required for nuclear clustering of Polycomb group response elements.

Authors:  Charlotte Grimaud; Frédéric Bantignies; Manika Pal-Bhadra; Pallavi Ghana; Utpal Bhadra; Giacomo Cavalli
Journal:  Cell       Date:  2006-03-10       Impact factor: 41.582

8.  Antisense globin RNA in mouse erythroid tissues: structure, origin, and possible function.

Authors:  V Volloch; B Schweitzer; S Rits
Journal:  Proc Natl Acad Sci U S A       Date:  1996-03-19       Impact factor: 11.205

9.  The transcriptional landscape of the mammalian genome.

Authors:  P Carninci; T Kasukawa; S Katayama; J Gough; M C Frith; N Maeda; R Oyama; T Ravasi; B Lenhard; C Wells; R Kodzius; K Shimokawa; V B Bajic; S E Brenner; S Batalov; A R R Forrest; M Zavolan; M J Davis; L G Wilming; V Aidinis; J E Allen; A Ambesi-Impiombato; R Apweiler; R N Aturaliya; T L Bailey; M Bansal; L Baxter; K W Beisel; T Bersano; H Bono; A M Chalk; K P Chiu; V Choudhary; A Christoffels; D R Clutterbuck; M L Crowe; E Dalla; B P Dalrymple; B de Bono; G Della Gatta; D di Bernardo; T Down; P Engstrom; M Fagiolini; G Faulkner; C F Fletcher; T Fukushima; M Furuno; S Futaki; M Gariboldi; P Georgii-Hemming; T R Gingeras; T Gojobori; R E Green; S Gustincich; M Harbers; Y Hayashi; T K Hensch; N Hirokawa; D Hill; L Huminiecki; M Iacono; K Ikeo; A Iwama; T Ishikawa; M Jakt; A Kanapin; M Katoh; Y Kawasawa; J Kelso; H Kitamura; H Kitano; G Kollias; S P T Krishnan; A Kruger; S K Kummerfeld; I V Kurochkin; L F Lareau; D Lazarevic; L Lipovich; J Liu; S Liuni; S McWilliam; M Madan Babu; M Madera; L Marchionni; H Matsuda; S Matsuzawa; H Miki; F Mignone; S Miyake; K Morris; S Mottagui-Tabar; N Mulder; N Nakano; H Nakauchi; P Ng; R Nilsson; S Nishiguchi; S Nishikawa; F Nori; O Ohara; Y Okazaki; V Orlando; K C Pang; W J Pavan; G Pavesi; G Pesole; N Petrovsky; S Piazza; J Reed; J F Reid; B Z Ring; M Ringwald; B Rost; Y Ruan; S L Salzberg; A Sandelin; C Schneider; C Schönbach; K Sekiguchi; C A M Semple; S Seno; L Sessa; Y Sheng; Y Shibata; H Shimada; K Shimada; D Silva; B Sinclair; S Sperling; E Stupka; K Sugiura; R Sultana; Y Takenaka; K Taki; K Tammoja; S L Tan; S Tang; M S Taylor; J Tegner; S A Teichmann; H R Ueda; E van Nimwegen; R Verardo; C L Wei; K Yagi; H Yamanishi; E Zabarovsky; S Zhu; A Zimmer; W Hide; C Bult; S M Grimmond; R D Teasdale; E T Liu; V Brusic; J Quackenbush; C Wahlestedt; J S Mattick; D A Hume; C Kai; D Sasaki; Y Tomaru; S Fukuda; M Kanamori-Katayama; M Suzuki; J Aoki; T Arakawa; J Iida; K Imamura; M Itoh; T Kato; H Kawaji; N Kawagashira; T Kawashima; M Kojima; S Kondo; H Konno; K Nakano; N Ninomiya; T Nishio; M Okada; C Plessy; K Shibata; T Shiraki; S Suzuki; M Tagami; K Waki; A Watahiki; Y Okamura-Oho; H Suzuki; J Kawai; Y Hayashizaki
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

Review 10.  Steroid receptor RNA activator (SRA1): unusual bifaceted gene products with suspected relevance to breast cancer.

Authors:  Etienne Leygue
Journal:  Nucl Recept Signal       Date:  2007-08-03
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  6 in total

1.  Transcriptional silencing by hairpin RNAs complementary to a gene promoter.

Authors:  Yongjun Chu; Roya Kalantari; David W Dodd; David R Corey
Journal:  Nucleic Acid Ther       Date:  2012-06       Impact factor: 5.486

Review 2.  State-of-the-art gene-based therapies: the road ahead.

Authors:  Mark A Kay
Journal:  Nat Rev Genet       Date:  2011-04-06       Impact factor: 53.242

Review 3.  From discovery to function: the expanding roles of long noncoding RNAs in physiology and disease.

Authors:  Miao Sun; W Lee Kraus
Journal:  Endocr Rev       Date:  2014-11-26       Impact factor: 19.871

4.  Activation of LDL receptor expression by small RNAs complementary to a noncoding transcript that overlaps the LDLR promoter.

Authors:  Masayuki Matsui; Fuminori Sakurai; Sayda Elbashir; Donald J Foster; Muthiah Manoharan; David R Corey
Journal:  Chem Biol       Date:  2010-12-22

5.  Enhancers and silencers: an integrated and simple model for their function.

Authors:  Petros Kolovos; Tobias A Knoch; Frank G Grosveld; Peter R Cook; Argyris Papantonis
Journal:  Epigenetics Chromatin       Date:  2012-01-09       Impact factor: 4.954

6.  Effects of cold acclimation and dsRNA injections on Gs1l gene splicing in Drosophila montana.

Authors:  David Hopkins; Tapio Envall; Noora Poikela; Olli T Pentikäinen; Maaria Kankare
Journal:  Sci Rep       Date:  2018-05-15       Impact factor: 4.379

  6 in total

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