Literature DB >> 20588307

Genome-wide scan identifies a quantitative trait locus at 4p15.3 for serum urate.

Nik Cummings1, Thomas D Dyer, Navaratnam Kotea, Sudhir Kowlessur, Pierrot Chitson, Paul Zimmet, John Blangero, Jeremy B M Jowett.   

Abstract

Elevated serum urate levels lead to gout and are associated with hypertension, metabolic syndrome, type 2 diabetes and cardiovascular diseases. The purpose of this study was to identify evidence for genetic linkage with serum urate and to determine whether variation within positional candidate genes is associated with serum urate levels in a non-European population. Genetic linkage analysis and single nucleotide polymorphism (SNP) genotyping was performed in a large family pedigree cohort from Mauritius. We assessed associations between serum urate levels and 97 SNPs in a positional candidate gene, SLC2A9. A genome-wide scan identified a new region with evidence for linkage for serum urate at 4p15.3. SNP genotyping identified significant association between six SNP variants in SLC2A9 and serum urate levels. Allelic and gender-based effects were noted for several SNPs. Significant correlations were also observed between serum urate levels and individual components of metabolic syndrome. Our study results implicate genetic variation in SLC2A9 in influencing levels of serum urate over a broad range of values in a large Mauritian family cohort.

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Year:  2010        PMID: 20588307      PMCID: PMC2987471          DOI: 10.1038/ejhg.2010.97

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  18 in total

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2.  Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix.

Authors:  J Li; L Ji
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3.  Quantitative trait nucleotide analysis using Bayesian model selection.

Authors:  John Blangero; Harald H H Goring; Jack W Kent; Jeff T Williams; Charles P Peterson; Laura Almasy; Thomas D Dyer
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4.  Multipoint quantitative-trait linkage analysis in general pedigrees.

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5.  The use of measured genotype information in the analysis of quantitative phenotypes in man. I. Models and analytical methods.

Authors:  E Boerwinkle; R Chakraborty; C F Sing
Journal:  Ann Hum Genet       Date:  1986-05       Impact factor: 1.670

6.  Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results.

Authors:  E Lander; L Kruglyak
Journal:  Nat Genet       Date:  1995-11       Impact factor: 38.330

7.  Two independent mutational events in the loss of urate oxidase during hominoid evolution.

Authors:  X W Wu; D M Muzny; C C Lee; C T Caskey
Journal:  J Mol Evol       Date:  1992-01       Impact factor: 2.395

Review 8.  Is there a pathogenetic role for uric acid in hypertension and cardiovascular and renal disease?

Authors:  Richard J Johnson; Duk-Hee Kang; Daniel Feig; Salah Kivlighn; John Kanellis; Susumu Watanabe; Katherine R Tuttle; Bernardo Rodriguez-Iturbe; Jaime Herrera-Acosta; Marilda Mazzali
Journal:  Hypertension       Date:  2003-04-21       Impact factor: 10.190

9.  Relation of serum uric acid to mortality and ischemic heart disease. The NHANES I Epidemiologic Follow-up Study.

Authors:  D S Freedman; D F Williamson; E W Gunter; T Byers
Journal:  Am J Epidemiol       Date:  1995-04-01       Impact factor: 4.897

10.  Genetic influences on type 2 diabetes and metabolic syndrome related quantitative traits in Mauritius.

Authors:  Jeremy B Jowett; Vincent P Diego; Navaratnam Kotea; Sudhir Kowlessur; Pierrot Chitson; Thomas D Dyer; Paul Zimmet; John Blangero
Journal:  Twin Res Hum Genet       Date:  2009-02       Impact factor: 1.587

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  6 in total

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Review 2.  Physiology, Development, and Disease Modeling in the Drosophila Excretory System.

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Journal:  Genetics       Date:  2020-02       Impact factor: 4.562

3.  Association between glucokinase regulator gene polymorphisms and serum uric acid levels in Taiwanese adolescents.

Authors:  Jhih-Syuan Liu; Chang-Hsun Hsieh; Li-Ju Ho; Chieh-Hua Lu; Ruei-Yu Su; Fu-Huang Lin; Sheng-Chiang Su; Feng-Chih Kuo; Nain-Feng Chu; Yi-Jen Hung
Journal:  Sci Rep       Date:  2022-04-01       Impact factor: 4.379

4.  Genome-wide association analysis confirms and extends the association of SLC2A9 with serum uric acid levels to Mexican Americans.

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Journal:  Front Genet       Date:  2013-12-16       Impact factor: 4.599

5.  Heritability and Genome-Wide Association Analyses of Serum Uric Acid in Middle and Old-Aged Chinese Twins.

Authors:  Weijing Wang; Dongfeng Zhang; Chunsheng Xu; Yili Wu; Haiping Duan; Shuxia Li; Qihua Tan
Journal:  Front Endocrinol (Lausanne)       Date:  2018-03-06       Impact factor: 5.555

6.  The association between genetic polymorphisms in ABCG2 and SLC2A9 and urate: an updated systematic review and meta-analysis.

Authors:  Thitiya Lukkunaprasit; Sasivimol Rattanasiri; Saowalak Turongkaravee; Naravut Suvannang; Atiporn Ingsathit; John Attia; Ammarin Thakkinstian
Journal:  BMC Med Genet       Date:  2020-10-21       Impact factor: 2.103

  6 in total

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