| Literature DB >> 20585637 |
Viviane Hénaux1, Michael D Samuel, Christine M Bunck.
Abstract
There is growing interest in avian influenza (AI) epidemiology to predict disease risk in wild and domestic birds, and prevent transmission to humans. However, understanding the epidemic dynamics of highly pathogenic (HPAI) viruses remains challenging because they have rarely been detected in wild birds. We used modeling to integrate available scientific information from laboratory and field studies, evaluate AI dynamics in individual hosts and waterfowl populations, and identify key areas for future research. We developed a Susceptible-Exposed-Infectious-Recovered (SEIR) model and used published laboratory challenge studies to estimate epidemiological parameters (rate of infection, latency period, recovery and mortality rates), considering the importance of age classes, and virus pathogenicity. Infectious contact leads to infection and virus shedding within 1-2 days, followed by relatively slower period for recovery or mortality. We found a shorter infectious period for HPAI than low pathogenic (LP) AI, which may explain that HPAI has been much harder to detect than LPAI during surveillance programs. Our model predicted a rapid LPAI epidemic curve, with a median duration of infection of 50-60 days and no fatalities. In contrast, HPAI dynamics had lower prevalence and higher mortality, especially in young birds. Based on field data from LPAI studies, our model suggests to increase surveillance for HPAI in post-breeding areas, because the presence of immunologically naïve young birds is predicted to cause higher HPAI prevalence and bird losses during this season. Our results indicate a better understanding of the transmission, infection, and immunity-related processes is required to refine predictions of AI risk and spread, improve surveillance for HPAI in wild birds, and develop disease control strategies to reduce potential transmission to domestic birds and/or humans.Entities:
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Year: 2010 PMID: 20585637 PMCID: PMC2890401 DOI: 10.1371/journal.pone.0010997
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Estimated transition rates and median time periods between epidemiological states for AI in waterfowl.
| HP | LP | ||||||
| Parameter | Adult | Young | Both ages | Adult | Young | Both ages | |
| δ (S→I) | rate±SD | 2.98±1.98 | 0.76±0.07 | 0.92±0.10 | 0.78±0.41 | 0.38±0.15 | 0.46±0.11 |
| median time (day) | 0.23 | 0.91 | 0.76 | 0.89 | 1.83 | 1.50 | |
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| σ (E→I) | rate±SD | 2.47±0.40 | 1.12±0.15 | 2.47±0.37 | 0.54±0.13 | † | 0.57±0.13 |
| median time (day) | 0.28 | 0.62 | 0.28 | 1.28 | 1.21 | ||
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| τ | rate±SD | n/a | 2.39±0.99 | 1.46±0.29 | n/a | n/a | 2.44±3.96 |
| median time (day) | 0.29 | 0.48 | 0.28 | ||||
| γ (I→R) | scale±SD | 4.62±1.17 | 5.32±1.07 | 9.81±1.30 | 11.28±1.19 | ||
| shape | 2.46 | 2.46 | 2.46 | 2.46 | |||
| median time (day) | 4.62 | 5.32 | 9.81 | 11.28 | |||
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| scale±SD | 17.90±1.29 | 5.16±1.09 | n/a | n/a | ||
| shape | 2.26 | 2.26 | |||||
| median time (day) | 17.90 | 5.16 | |||||
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Rates estimated from published laboratory challenge trials, see methods for details.
n, number of laboratory challenges; n/a, not applicable; †, non-convergence of the model.
By subtracting the latent period (1/σ) from the period for susceptible birds to become infectious (1/δ), we estimated the time for susceptible to become exposed (1/τ) and the infection rate τ.
Figure 1Predicted prevalence and disease dynamics in wild birds.
A: LPAI peak prevalence for hatch-year waterfowl and estimated rate of infectious contact θ; θ values between 0.01 and 0.08 corresponded with LPAI prevalence observed in young waterfowl at post-breeding areas (15–61%, delimited by dotted lines). B and C: Predicted dynamics during LPAI and HPAI outbreaks, respectively, for Susceptible (blue), Exposed (green), Infectious (black), Recovered (red), and Dead (purple) birds in post-breeding (dashed lines) and wintering populations (solid lines). Graphs based on mean epidemiological parameters (Table 1) and an infectious contact rate (θ) of 0.04. D. Comparison of prevalence dynamics during LPAI (red) and HPAI (black) epidemics in post-breeding (dashed lines) and wintering populations (solid lines).