Literature DB >> 20580973

Single mRNA tracking in live cells.

Hye Yoon Park1, Adina R Buxbaum, Robert H Singer.   

Abstract

Asymmetric distribution of mRNA is a prevalent phenomenon observed in diverse cell types. The posttranscriptional movement and localization of mRNA provides an important mechanism to target certain proteins to specific cytoplasmic regions of their function. Recent technical advances have enabled real-time visualization of single mRNA molecules in living cells. Studies analyzing the motion of individual mRNAs have shed light on the complex RNA transport system. This chapter presents an overview of general approaches for single particle tracking and some methodologies that are used for single mRNA detection. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID： 20580973      PMCID： PMC3158948          DOI： 10.1016/S0076-6879(10)72003-6

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


  63 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-28       Impact factor: 11.205

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Journal:  J Neurosci       Date:  1996-12-15       Impact factor: 6.167

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Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

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Journal:  Nature       Date:  1989-07-27       Impact factor: 49.962

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Journal:  Nature       Date:  1988-02-04       Impact factor: 49.962

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8.  Probing microtubule-dependent intracellular motility with nanometre particle video ultramicroscopy (nanovid ultramicroscopy).

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Authors:  J B Lawrence; R H Singer
Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

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Journal:  J Cell Biol       Date:  1982-12       Impact factor: 10.539
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  32 in total

Review 1.  Localization and dynamics of nuclear speckles in plants.

Authors:  Anireddy S N Reddy; Irene S Day; Janett Göhring; Andrea Barta
Journal:  Plant Physiol       Date:  2011-11-01       Impact factor: 8.340

2.  RNA lights up.

Authors:  John S Mattick; Michael B Clark
Journal:  Nat Biotechnol       Date:  2011-10-13       Impact factor: 54.908

3.  Single-mRNA counting using fluorescent in situ hybridization in budding yeast.

Authors:  Tatjana Trcek; Jeffrey A Chao; Daniel R Larson; Hye Yoon Park; Daniel Zenklusen; Shailesh M Shenoy; Robert H Singer
Journal:  Nat Protoc       Date:  2012-02-02       Impact factor: 13.491

4.  Molecular-beacon-based tricomponent probe for SNP analysis in folded nucleic acids.

Authors:  Camha Nguyen; Jeffrey Grimes; Yulia V Gerasimova; Dmitry M Kolpashchikov
Journal:  Chemistry       Date:  2011-09-28       Impact factor: 5.236

5.  Dissecting non-coding RNA mechanisms in cellulo by Single-molecule High-Resolution Localization and Counting.

Authors:  Sethuramasundaram Pitchiaya; Vishalakshi Krishnan; Thomas C Custer; Nils G Walter
Journal:  Methods       Date:  2013-06-29       Impact factor: 3.608

6.  A single molecule approach to mRNA transport by a class V myosin.

Authors:  Thomas E Sladewski; Kathleen M Trybus
Journal:  RNA Biol       Date:  2014-10-31       Impact factor: 4.652

Review 7.  CRISPR Tools for Systematic Studies of RNA Regulation.

Authors:  Jesse Engreitz; Omar Abudayyeh; Jonathan Gootenberg; Feng Zhang
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

8.  Unraveling the Thousand Word Picture: An Introduction to Super-Resolution Data Analysis.

Authors:  Antony Lee; Konstantinos Tsekouras; Christopher Calderon; Carlos Bustamante; Steve Pressé
Journal:  Chem Rev       Date:  2017-04-17       Impact factor: 60.622

9.  mRNA quantification using single-molecule FISH in Drosophila embryos.

Authors:  Tatjana Trcek; Timothée Lionnet; Hari Shroff; Ruth Lehmann
Journal:  Nat Protoc       Date:  2016-06-08       Impact factor: 13.491

Review 10.  Recent progress in single-molecule studies of mRNA localization in vivo.

Authors:  Songhee H Kim; Melissa Vieira; Jae Youn Shim; Hongyoung Choi; Hye Yoon Park
Journal:  RNA Biol       Date:  2018-11-14       Impact factor: 4.652
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