Literature DB >> 20576737

Speciation genes in plants.

Loren H Rieseberg1, Benjamin K Blackman.   

Abstract

BACKGROUND: Analyses of speciation genes--genes that contribute to the cessation of gene flow between populations--can offer clues regarding the ecological settings, evolutionary forces and molecular mechanisms that drive the divergence of populations and species. This review discusses the identities and attributes of genes that contribute to reproductive isolation (RI) in plants, compares them with animal speciation genes and investigates what these genes can tell us about speciation. SCOPE: Forty-one candidate speciation genes were identified in the plant literature. Of these, seven contributed to pre-pollination RI, one to post-pollination, prezygotic RI, eight to hybrid inviability, and 25 to hybrid sterility. Genes, gene families and genetic pathways that were frequently found to underlie the evolution of RI in different plant groups include the anthocyanin pathway and its regulators (pollinator isolation), S RNase-SI genes (unilateral incompatibility), disease resistance genes (hybrid necrosis), chimeric mitochondrial genes (cytoplasmic male sterility), and pentatricopeptide repeat family genes (cytoplasmic male sterility).
CONCLUSIONS: The most surprising conclusion from this review is that identities of genes underlying both prezygotic and postzygotic RI are often predictable in a broad sense from the phenotype of the reproductive barrier. Regulatory changes (both cis and trans) dominate the evolution of pre-pollination RI in plants, whereas a mix of regulatory mutations and changes in protein-coding genes underlie intrinsic postzygotic barriers. Also, loss-of-function mutations and copy number variation frequently contribute to RI. Although direct evidence of positive selection on speciation genes is surprisingly scarce in plants, analyses of gene family evolution, along with theoretical considerations, imply an important role for diversifying selection and genetic conflict in the evolution of RI. Unlike in animals, however, most candidate speciation genes in plants exhibit intraspecific polymorphism, consistent with an important role for stochastic forces and/or balancing selection in development of RI in plants.

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Year:  2010        PMID: 20576737      PMCID: PMC2924826          DOI: 10.1093/aob/mcq126

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  141 in total

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Authors:  H Allen Orr; J P Masly; Nitin Phadnis
Journal:  J Hered       Date:  2006-12-28       Impact factor: 2.645

Review 3.  Hybrid necrosis: autoimmunity as a potential gene-flow barrier in plant species.

Authors:  Kirsten Bomblies; Detlef Weigel
Journal:  Nat Rev Genet       Date:  2007-04-03       Impact factor: 53.242

4.  Changes in regulation of a transcription factor lead to autogamy in cultivated tomatoes.

Authors:  Kai-Yi Chen; Bin Cong; Rod Wing; Julia Vrebalov; Steven D Tanksley
Journal:  Science       Date:  2007-10-26       Impact factor: 47.728

5.  Characterization of benzylalcohol acetyltransferases in scented and non-scented Clarkia species.

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Journal:  Plant Cell Physiol       Date:  1999-09       Impact factor: 4.927

6.  The role of recently derived FT paralogs in sunflower domestication.

Authors:  Benjamin K Blackman; Jared L Strasburg; Andrew R Raduski; Scott D Michaels; Loren H Rieseberg
Journal:  Curr Biol       Date:  2010-03-18       Impact factor: 10.834

7.  Incompatibility of nuclear and mitochondrial genomes causes hybrid sterility between two yeast species.

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Journal:  Cell       Date:  2008-12-12       Impact factor: 41.582

8.  Mitochondrial gene in the nuclear genome induces reproductive barrier in rice.

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

9.  Imprinting of the polycomb group gene MEDEA serves as a ploidy sensor in Arabidopsis.

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Journal:  PLoS Genet       Date:  2009-09-25       Impact factor: 5.917

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Authors:  Takao Koeduka; Irina Orlova; Thomas J Baiga; Joseph P Noel; Natalia Dudareva; Eran Pichersky
Journal:  Plant J       Date:  2009-02-13       Impact factor: 6.417

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  107 in total

1.  Advances in biotechnology and linking outputs to variation in complex traits: Plant and Animal Genome meeting January 2012.

Authors:  R Appels; R Barrero; M Bellgard
Journal:  Funct Integr Genomics       Date:  2012-02-22       Impact factor: 3.410

Review 2.  Establishment of new mutations under divergence and genome hitchhiking.

Authors:  Jeffrey L Feder; Richard Gejji; Sam Yeaman; Patrik Nosil
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-02-05       Impact factor: 6.237

3.  Genomic divergence during speciation: causes and consequences.

Authors:  Patrik Nosil; Jeffrey L Feder
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-02-05       Impact factor: 6.237

Review 4.  Reproductive isolation during domestication.

Authors:  Hannes Dempewolf; Kathryn A Hodgins; Sonja E Rummell; Norman C Ellstrand; Loren H Rieseberg
Journal:  Plant Cell       Date:  2012-07-05       Impact factor: 11.277

5.  Genes in evolution: the control of diversity and speciation.

Authors:  J S Pat Heslop-Harrison
Journal:  Ann Bot       Date:  2010-09       Impact factor: 4.357

6.  Novel protein genes in animal mtDNA: a new sex determination system in freshwater mussels (Bivalvia: Unionoida)?

Authors:  Sophie Breton; Donald T Stewart; Sally Shepardson; Richard J Trdan; Arthur E Bogan; Eric G Chapman; Andrew J Ruminas; Helen Piontkivska; Walter R Hoeh
Journal:  Mol Biol Evol       Date:  2010-12-20       Impact factor: 16.240

7.  Progress and Promise in using Arabidopsis to Study Adaptation, Divergence, and Speciation.

Authors:  Ben Hunter; Kirsten Bomblies
Journal:  Arabidopsis Book       Date:  2010-09-29

8.  Postzygotic isolation involves strong mitochondrial and sex-specific effects in Tigriopus californicus, a species lacking heteromorphic sex chromosomes.

Authors:  B R Foley; C G Rose; D E Rundle; W Leong; S Edmands
Journal:  Heredity (Edinb)       Date:  2013-07-17       Impact factor: 3.821

9.  Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-03       Impact factor: 11.205

10.  Selfish evolution of cytonuclear hybrid incompatibility in Mimulus.

Authors:  Andrea L Case; Findley R Finseth; Camille M Barr; Lila Fishman
Journal:  Proc Biol Sci       Date:  2016-09-14       Impact factor: 5.349

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