Literature DB >> 20570652

Characterization of plant eukaryotic translation initiation factor 6 (eIF6) genes: The essential role in embryogenesis and their differential expression in Arabidopsis and rice.

Yuki Kato1, Mineko Konishi, Mikao Shigyo, Tadakatsu Yoneyama, Shuichi Yanagisawa.   

Abstract

Eukaryotic translation initiation factor 6 (eIF6) is an essential component of ribosome biogenesis. In our present study, we characterize plant eIF6 genes for the first time. Although a single gene encodes eIF6 in yeast and animals, two genes were found to encode proteins homologous to animal and yeast eIF6 in Arabidopsis and rice, denoted At-eIF6;1 and At-eIF6;2, and Os-eIF6;1 and Os-eIF6;2, respectively. Analysis of the yeast eif6 (tif6) mutant suggested that plant eIF6, at least in the case of At-eIF6;1, can complement the essential function of eIF6 in yeast. Evidence for the essential role of eIF6 in plants was also provided by the embryonic-lethal phenotype of the at-eif6;1 mutant. In contrast, At-eIF6;2 appears not to be essential due to its very low expression level and the normal growth phenotype of the eif6;2 mutants. Consistent with the putative role of plant eIF6 in ribosome biogenesis, At-eIF6;1 is predominately expressed in tissues where cell division actively proceeds under the control of intronic cis-regulatory elements. On the other hand, both Os-eIF6;1 and Os-eIF6;2 are probably active genes because they are expressed at significant expression levels. Interestingly, the supply of ammonium nitrate as a plant nutrient was found to induce specifically the expression of Os-eIF6;2. Our present findings indicate that the eIF6 genes have differently evolved in plant and animal kingdoms and also in distinct plant species. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20570652     DOI: 10.1016/j.bbrc.2010.06.001

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  11 in total

Review 1.  Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.

Authors:  Julio Sáez-Vásquez; Michel Delseny
Journal:  Plant Cell       Date:  2019-06-25       Impact factor: 11.277

2.  Identification of eukaryotic translation initiation factors and the temperature-dependent nature of Turnip mosaic virus epidemics in allopolyploid Brassica juncea.

Authors:  Jannat Shopan; Chang Liu; Zhongyuan Hu; Mingfang Zhang; Jinghua Yang
Journal:  3 Biotech       Date:  2020-01-28       Impact factor: 2.406

3.  Transcriptional repression caused by Dof5.8 is involved in proper vein network formation in Arabidopsis thaliana leaves.

Authors:  Mineko Konishi; Shuichi Yanagisawa
Journal:  J Plant Res       Date:  2015-03-21       Impact factor: 2.629

4.  Eukaryotic initiation factor 6, an evolutionarily conserved regulator of ribosome biogenesis and protein translation.

Authors:  Jianjun Guo; Zhaoqing Jin; Xiaohan Yang; Jian-Feng Li; Jin-Gui Chen
Journal:  Plant Signal Behav       Date:  2011-05-01

5.  Discovery of nitrate-CPK-NLP signalling in central nutrient-growth networks.

Authors:  Kun-Hsiang Liu; Yajie Niu; Mineko Konishi; Yue Wu; Hao Du; Hoo Sun Chung; Lei Li; Marie Boudsocq; Matthew McCormack; Shugo Maekawa; Tetsuya Ishida; Chao Zhang; Kevan Shokat; Shuichi Yanagisawa; Jen Sheen
Journal:  Nature       Date:  2017-05-10       Impact factor: 69.504

6.  Identification and Expression Analysis of Ribosome Biogenesis Factor Co-orthologs in Solanum lycopersicum.

Authors:  Stefan Simm; Sotirios Fragkostefanakis; Puneet Paul; Mario Keller; Jens Einloft; Klaus-Dieter Scharf; Enrico Schleiff
Journal:  Bioinform Biol Insights       Date:  2015-02-04

7.  The Rice Eukaryotic Translation Initiation Factor 3 Subunit e (OseIF3e) Influences Organ Size and Pollen Maturation.

Authors:  Wenyi Wang; Mengyun Xu; Xuejiao Liu; Jumin Tu
Journal:  Front Plant Sci       Date:  2016-09-20       Impact factor: 5.753

8.  Comparative Analysis of Transcriptomes in Rhizophoraceae Provides Insights into the Origin and Adaptive Evolution of Mangrove Plants in Intertidal Environments.

Authors:  Wuxia Guo; Haidan Wu; Zhang Zhang; Chao Yang; Ling Hu; Xianggang Shi; Shuguang Jian; Suhua Shi; Yelin Huang
Journal:  Front Plant Sci       Date:  2017-05-16       Impact factor: 5.753

9.  40S ribosome biogenesis co-factors are essential for gametophyte and embryo development.

Authors:  Sandra Missbach; Benjamin L Weis; Roman Martin; Stefan Simm; Markus T Bohnsack; Enrico Schleiff
Journal:  PLoS One       Date:  2013-01-30       Impact factor: 3.240

10.  Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae.

Authors:  Lei Zhao; Ning Zhang; Peng-Fei Ma; Qi Liu; De-Zhu Li; Zhen-Hua Guo
Journal:  PLoS One       Date:  2013-05-29       Impact factor: 3.240

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