| Literature DB >> 20565800 |
Yvana C Jorge1, Marcia C Duarte, Ana E Silva.
Abstract
BACKGROUND: Gastric cancer can progress from a chronic inflammation of the gastric mucosa resulting from Helicobacter pylori infection that activates the inflammatory response of the host. Therefore, polymorphisms in genes involved in the inflammatory response, such as inducible nitric oxide synthase (NOS2), have been implicated in gastric carcinogenesis. The aim of this study was to evaluate the association of NOS2 polymorphisms Ser608Leu (rs2297518) in exon 16, -954G/C and -1173C/T, both in the promoter region, with gastric cancer and chronic gastritis and the association of cancer with risk factors such as smoking, alcohol intake and H. pylori infection.Entities:
Mesh:
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Year: 2010 PMID: 20565800 PMCID: PMC2906411 DOI: 10.1186/1471-230X-10-64
Source DB: PubMed Journal: BMC Gastroenterol ISSN: 1471-230X Impact factor: 3.067
PCR-RFLP conditions for NOS2 gene polymorphisms and gene IL-1β.
| Genes | Primers | Enzyme Time/T° | Fragments | Reference |
|---|---|---|---|---|
| F: 5' - TGTAAACCAACTTCCGTGGTG - 3' | 288 bp | 17 | ||
| F: 5' - CATATGTATGGGAATACTGTATTTCAG - 3' | 573 bp | 18 | ||
| F:5' - CAAAGATCCTTGAGCTCTGA - 3' | 199 bp | 33 | ||
| IL-1β | F:5' - CATGTGACCTGCTCGTCAGT - 3' | 372 bp | - |
T°, temperature.
Genotype and allele frequencies of NOS2 polymorphisms Ser608Leu, -954G/C and -1173C/T in gastric adenocarcinoma (GA), chronic gastritis (CG), and control (C) groups.
| Genotypes/Alleles | GA | C | OR (95%CI) | p | CG | C | OR (95%CI) | p |
|---|---|---|---|---|---|---|---|---|
| Ser608Leu | ||||||||
| CC | 106 (70.7) | 113 (69) | 0.92 (0.57-1.49) | 0.81 | 107 (66.9) | 113 (69) | 1.10 (0.69-1.75) | 0.72 |
| CT | 36 (24) | 39 (23.8) | 33 (20.6) | 39 (23.8) | ||||
| TT | 8 (5.3) | 12 (7.2) | 20 (12.5) | 12 (7.2) | ||||
| C | 0.83 | 0.81 | 0.88 (0.59-1.32) | 0.61 | 0.77 | 0.81 | 1.24 (0.85-1.82) | 0.29 |
| T | 0.17 | 0.19 | 0.33 | 0.19 | ||||
| GG | 77 (51.3) | 115 (70.1) | 2.23 (1.4-3.53) | <0.01 | 115 (71.9) | 115 (70.1) | 0.92 (0.57-1.49) | 0.81 |
| GC | 62 (41.3) | 38 (23.2) | 36 (22.5) | 38 (23.2) | ||||
| CC | 11 (7.4) | 11 (6.7) | 9 (5.6) | 11 (6.7) | ||||
| G | 0.72 | 0.82 | 1.74 (1.19-2.53) | <0.01 | 0.83 | 0.82 | 0.91 (0.6-1.36) | 0.68 |
| C | 0.28 | 0.18 | 0.17 | 0.18 | ||||
| CC | 150 (100) | 164 (100) | ND | ND | 160 (100) | 164 | ND | ND |
| CT | 0 (0) | 0 (0) | 0 (0) | 0 (0) | ||||
| TT | 0 (0) | 0 (0) | 0 (0) | 0 (0) | ||||
| C | 1 | 1 | ND | ND | 1 | 1 | ND | ND |
| T | 0 | 0 | 0 | 0 |
N, Number of individuals; OR, Odds Ratio; CI, Confidence Interval; P, probability; ND, not done.
Distribution of risk factors, genotypes of NOS2 polymorphisms Ser608Leu and -954G/C, and odds ratios (OR) for gastric adenocarcinoma (GA), chronic gastritis (CG), and control (C) groups.
| Variables | GA × C | CG × C | ||||
|---|---|---|---|---|---|---|
| Female | 36/78 | Reference | 82/78 | Reference | ||
| Male | 114/86 | 1.79 (1.02-3.15) | 0.04 | 78/86 | 0.52 (0.31-0.88) | 0.01 |
| <57 years | 42/96 | Reference | 91/96 | Reference | ||
| ≥57 years | 108/68 | 2.94 (1.77-4.90) | <0.01 | 69/68 | 1.03 (0.64-1.65) | 0.88 |
| Nonsmokers | 43/103 | Reference | 73/103 | Reference | ||
| Smokers | 107/61 | 2.68 (1.58-4.53) | <0.01 | 87/61 | 1.93 (1.19-3.13) | <0.01 |
| Nondrinkers | 65/132 | Reference | 100/132 | Reference | ||
| Drinkers | 85/32 | 3.60 (2.05-6.32) | <0.01 | 60/32 | 2.79 (1.55-5.02) | <0.01 |
| Ser608Leu | ||||||
| CC | 106/111 | Reference | 108/111 | Reference | ||
| CT+TT | 44/53 | 1.19 (0.69-2.08) | 0.51 | 52/53 | 1.12 (0.68-1.83) | 0.64 |
| GG | 77/112 | Reference | 116/112 | Reference | ||
| GC+CC | 73/52 | 1.87 (1.12-3.13) | 0.01 | 44/52 | 0.83 (0.50-1.38) | 0.48 |
N, Number of individuals; OR, Odds Ratio; CI, Confidence Interval; P, probability.