Literature DB >> 20562862

A mouse knockout library for secreted and transmembrane proteins.

Tracy Tang1, Li Li, Jerry Tang, Yun Li, Wei Yu Lin, Flavius Martin, Deanna Grant, Mark Solloway, Leon Parker, Weilan Ye, William Forrest, Nico Ghilardi, Tamas Oravecz, Kenneth A Platt, Dennis S Rice, Gwenn M Hansen, Alejandro Abuin, Derek E Eberhart, Paul Godowski, Kathleen H Holt, Andrew Peterson, Brian P Zambrowicz, Frederic J de Sauvage.   

Abstract

Large collections of knockout organisms facilitate the elucidation of gene functions. Here we used retroviral insertion or homologous recombination to disrupt 472 genes encoding secreted and membrane proteins in mice, providing a resource for studying a large fraction of this important class of drug target. The knockout mice were subjected to a systematic phenotypic screen designed to uncover alterations in embryonic development, metabolism, the immune system, the nervous system and the cardiovascular system. The majority of knockout lines exhibited altered phenotypes in at least one of these therapeutic areas. To our knowledge, a comprehensive phenotypic assessment of a large number of mouse mutants generated by a gene-specific approach has not been described previously.

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Year:  2010        PMID: 20562862     DOI: 10.1038/nbt.1644

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  33 in total

1.  High-throughput mouse knockouts provide a functional analysis of the genome.

Authors:  C J Friddle; A Abuin; R Ramirez-Solis; L J Richter; E C Buxton; J Edwards; R A Finch; A Gupta; G Hansen; K H Holt; Y Hu; W Huang; C Jaing; B W Key; P Kipp; B Kohlhauff; Z Q Ma; D Markesich; M Newhouse; T Perry; K A Platt; D G Potter; N Qian; J Shaw; J Schrick; Z Z Shi; M J Sparks; D Tran; E R Wann; W Walke; J D Wallace; N Xu; Q Zhu; C Person; A T Sands; B P Zambrowicz
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2003

2.  Disruption and sequence identification of 2,000 genes in mouse embryonic stem cells.

Authors:  B P Zambrowicz; G A Friedrich; E C Buxton; S L Lilleberg; C Person; A T Sands
Journal:  Nature       Date:  1998-04-09       Impact factor: 49.962

3.  Syk tyrosine kinase required for mouse viability and B-cell development.

Authors:  A M Cheng; B Rowley; W Pao; A Hayday; J B Bolen; T Pawson
Journal:  Nature       Date:  1995-11-16       Impact factor: 49.962

4.  Perinatal lethality and blocked B-cell development in mice lacking the tyrosine kinase Syk.

Authors:  M Turner; P J Mee; P S Costello; O Williams; A A Price; L P Duddy; M T Furlong; R L Geahlen; V L Tybulewicz
Journal:  Nature       Date:  1995-11-16       Impact factor: 49.962

5.  Claudin 14 knockout mice, a model for autosomal recessive deafness DFNB29, are deaf due to cochlear hair cell degeneration.

Authors:  Tamar Ben-Yosef; Inna A Belyantseva; Thomas L Saunders; Elizabeth D Hughes; Kohei Kawamoto; Christina M Van Itallie; Lisa A Beyer; Kärin Halsey; Donald J Gardner; Edward R Wilcox; Julia Rasmussen; James M Anderson; David F Dolan; Andrew Forge; Yehoash Raphael; Sally A Camper; Thomas B Friedman
Journal:  Hum Mol Genet       Date:  2003-08-15       Impact factor: 6.150

6.  The knockout mouse project.

Authors:  Christopher P Austin; James F Battey; Allan Bradley; Maja Bucan; Mario Capecchi; Francis S Collins; William F Dove; Geoffrey Duyk; Susan Dymecki; Janan T Eppig; Franziska B Grieder; Nathaniel Heintz; Geoff Hicks; Thomas R Insel; Alexandra Joyner; Beverly H Koller; K C Kent Lloyd; Terry Magnuson; Mark W Moore; Andras Nagy; Jonathan D Pollock; Allen D Roses; Arthur T Sands; Brian Seed; William C Skarnes; Jay Snoddy; Philippe Soriano; David J Stewart; Francis Stewart; Bruce Stillman; Harold Varmus; Lyuba Varticovski; Inder M Verma; Thomas F Vogt; Harald von Melchner; Jan Witkowski; Richard P Woychik; Wolfgang Wurst; George D Yancopoulos; Stephen G Young; Brian Zambrowicz
Journal:  Nat Genet       Date:  2004-09       Impact factor: 38.330

Review 7.  Delta-like 4/Notch signaling and its therapeutic implications.

Authors:  Minhong Yan; Greg D Plowman
Journal:  Clin Cancer Res       Date:  2007-12-15       Impact factor: 12.531

8.  CLEC-2 is an essential platelet-activating receptor in hemostasis and thrombosis.

Authors:  Frauke May; Ina Hagedorn; Irina Pleines; Markus Bender; Timo Vögtle; Johannes Eble; Margitta Elvers; Bernhard Nieswandt
Journal:  Blood       Date:  2009-07-29       Impact factor: 22.113

9.  Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.

Authors:  Brian P Zambrowicz; Alejandro Abuin; Ramiro Ramirez-Solis; Lizabeth J Richter; James Piggott; Hector BeltrandelRio; Eric C Buxton; Joel Edwards; Rick A Finch; Carl J Friddle; Anupma Gupta; Gwenn Hansen; Yi Hu; Wenhu Huang; Crystal Jaing; Billie Wayne Key; Peter Kipp; Buckley Kohlhauff; Zhi-Qing Ma; Diane Markesich; Robert Payne; David G Potter; Ny Qian; Joseph Shaw; Jeff Schrick; Zheng-Zheng Shi; Mary Jean Sparks; Isaac Van Sligtenhorst; Peter Vogel; Wade Walke; Nianhua Xu; Qichao Zhu; Christophe Person; Arthur T Sands
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-10       Impact factor: 11.205

10.  EMPReSS: standardized phenotype screens for functional annotation of the mouse genome.

Authors:  S D M Brown; P Chambon; M Hrabé de Angelis
Journal:  Nat Genet       Date:  2005-11       Impact factor: 38.330

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  174 in total

Review 1.  Designing phenotyping studies for genetically engineered mice.

Authors:  C J Zeiss; J M Ward; H G Allore
Journal:  Vet Pathol       Date:  2011-09-19       Impact factor: 2.221

Review 2.  New approaches to the representation and analysis of phenotype knowledge in human diseases and their animal models.

Authors:  Paul N Schofield; John P Sundberg; Robert Hoehndorf; Georgios V Gkoutos
Journal:  Brief Funct Genomics       Date:  2011-09       Impact factor: 4.241

3.  Systematic phenotyping of mouse mutants.

Authors:  Wolfgang Wurst; Martin Hrabe de Angelis
Journal:  Nat Biotechnol       Date:  2010-07       Impact factor: 54.908

4.  Erythroferrone contributes to hepcidin suppression and iron overload in a mouse model of β-thalassemia.

Authors:  Léon Kautz; Grace Jung; Xin Du; Victoria Gabayan; Justin Chapman; Marc Nasoff; Elizabeta Nemeth; Tomas Ganz
Journal:  Blood       Date:  2015-08-14       Impact factor: 22.113

5.  Novel GPIHBP1-independent pathway for clearance of plasma TGs in Angptl4-/-Gpihbp1-/- mice.

Authors:  Emily M Cushing; Kelli L Sylvers; Xun Chi; Shwetha K Shetty; Brandon S J Davies
Journal:  J Lipid Res       Date:  2018-05-08       Impact factor: 5.922

6.  Podoplanin and CLEC-2 drive cerebrovascular patterning and integrity during development.

Authors:  Kate L Lowe; Brenda A Finney; Carsten Deppermann; René Hägerling; Salomé L Gazit; Jon Frampton; Christopher Buckley; Eric Camerer; Bernhard Nieswandt; Friedemann Kiefer; Steve P Watson
Journal:  Blood       Date:  2015-04-23       Impact factor: 22.113

7.  Hypothyroidism induced by loss of the manganese efflux transporter SLC30A10 may be explained by reduced thyroxine production.

Authors:  Chunyi Liu; Steven Hutchens; Thomas Jursa; William Shawlot; Elena V Polishchuk; Roman S Polishchuk; Beth K Dray; Andrea C Gore; Michael Aschner; Donald R Smith; Somshuvra Mukhopadhyay
Journal:  J Biol Chem       Date:  2017-08-31       Impact factor: 5.157

8.  Mice lacking ANGPTL8 (Betatrophin) manifest disrupted triglyceride metabolism without impaired glucose homeostasis.

Authors:  Yan Wang; Fabiana Quagliarini; Viktoria Gusarova; Jesper Gromada; David M Valenzuela; Jonathan C Cohen; Helen H Hobbs
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

Review 9.  Intracrine Regulation of Estrogen and Other Sex Steroid Levels in Endometrium and Non-gynecological Tissues; Pathology, Physiology, and Drug Discovery.

Authors:  Gonda Konings; Linda Brentjens; Bert Delvoux; Tero Linnanen; Karlijn Cornel; Pasi Koskimies; Marlies Bongers; Roy Kruitwagen; Sofia Xanthoulea; Andrea Romano
Journal:  Front Pharmacol       Date:  2018-09-19       Impact factor: 5.810

10.  Selective Involvement of the Checkpoint Regulator VISTA in Suppression of B-Cell, but Not T-Cell, Responsiveness by Monocytic Myeloid-Derived Suppressor Cells from Mice Infected with an Immunodeficiency-Causing Retrovirus.

Authors:  Kathy A Green; Li Wang; Randolph J Noelle; William R Green
Journal:  J Virol       Date:  2015-07-08       Impact factor: 5.103

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