Literature DB >> 20562248

Ruegeria faecimaris sp. nov., isolated from a tidal flat sediment.

Ki-Hoon Oh1, Yong-Taek Jung1, Tae-Kwang Oh1, Jung-Hoon Yoon1.   

Abstract

A Gram-negative-staining, non-motile and rod-shaped bacterial strain, HD-28(T), was isolated from a tidal flat of the Yellow Sea, Korea. Strain HD-28(T) grew optimally at pH 7.0-8.0 and 30 °C in the presence of 2-3 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain HD-28(T) was most closely related to species of the genus Ruegeria and exhibited 95.5-96.9 % 16S rRNA gene sequence similarity to the type strains of Ruegeria species. A neighbour-joining phylogenetic tree based on gyrB gene sequences also showed that strain HD-28(T) fell within the cluster comprising recognized species of the genus Ruegeria, showing 77.5-83.9 % sequence similarity. Strain HD-28(T) contained Q-10 as the predominant ubiquinone and C(18 : 1)ω7c as the major fatty acid. The major polar lipids detected in strain HD-28(T) were phosphatidylcholine, phosphatidylglycerol, an unidentified aminolipid and two unidentified lipids. The DNA G+C content was 57.9 mol%. Differential phenotypic properties, together with phylogenetic distinctiveness, demonstrated that strain HD-28(T) could be distinguished from recognized species of the genus Ruegeria. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain HD-28(T) is considered to represent a novel species of the genus Ruegeria, for which the name Ruegeria faecimaris sp. nov. is proposed. The type strain is HD-28(T) ( = KCTC 23044(T) = CCUG 58878(T)).

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Year:  2010        PMID: 20562248     DOI: 10.1099/ijs.0.025999-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

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Authors:  Sun Hwan Jeong; Sang Seob Lee
Journal:  Curr Microbiol       Date:  2016-05-31       Impact factor: 2.188

2.  Ruegeria haliotis sp. nov., Isolated from the Gut of the Abalone Haliotis rubra.

Authors:  Wen-Rui Cao; Dan-Dan Shang; Bang-Tao Liu; Yi-Hao Hu; Xun-Ke Sun; Yuan-Yuan Sun; Ming-Yu Jiang; Zong-Jun Du
Journal:  Curr Microbiol       Date:  2021-04-01       Impact factor: 2.188

3.  Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill.

Authors:  Helge-Ansgar Giebel; Franziska Klotz; Sonja Voget; Anja Poehlein; Katrin Grosser; Andreas Teske; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2016-10-13

4.  Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.

Authors:  Marco Dogs; Sonja Voget; Hazuki Teshima; Jörn Petersen; Karen Davenport; Hajnalka Dalingault; Amy Chen; Amrita Pati; Natalia Ivanova; Lynne A Goodwin; Patrick Chain; John C Detter; Sonja Standfest; Manfred Rohde; Sabine Gronow; Nikos C Kyrpides; Tanja Woyke; Meinhard Simon; Hans-Peter Klenk; Markus Göker; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2013-12-15
  4 in total

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