Literature DB >> 20560080

Isolation of mycobacterium species genomic DNA.

John T Belisle1, Spencer B Mahaffey, Preston J Hill.   

Abstract

A myriad of methods has been reported for the isolation of genomic DNA from Mycobacterium spp.; some methods use mechanical disruption of the bacterial cells, whereas others use some form of chemical or enzymatic lysis. Regardless of the approach, the end points remain efficient breaking of the complex mycobacterial cell wall and release of high-quality DNA that is suitable for manipulation and analyses by molecular genetic techniques. This chapter providers detailed methods for the large and small isolation of mycobacterial genomic DNA.

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Year:  2009        PMID: 20560080     DOI: 10.1007/978-1-59745-207-6_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

Review 1.  Performance and Application of 16S rRNA Gene Cycle Sequencing for Routine Identification of Bacteria in the Clinical Microbiology Laboratory.

Authors:  Deirdre L Church; Lorenzo Cerutti; Antoine Gürtler; Thomas Griener; Adrian Zelazny; Stefan Emler
Journal:  Clin Microbiol Rev       Date:  2020-09-09       Impact factor: 26.132

2.  Targeting the chromosome partitioning protein ParA in tuberculosis drug discovery.

Authors:  Shahista Nisa; Marian C J Blokpoel; Brian D Robertson; Joel D A Tyndall; Shichun Lun; William R Bishai; Ronan O'Toole
Journal:  J Antimicrob Chemother       Date:  2010-09-01       Impact factor: 5.790

3.  The cyclic peptide ecumicin targeting ClpC1 is active against Mycobacterium tuberculosis in vivo.

Authors:  Wei Gao; Jin-Yong Kim; Jeffrey R Anderson; Tatos Akopian; Seungpyo Hong; Ying-Yu Jin; Olga Kandror; Jong-Woo Kim; In-Ae Lee; Sun-Young Lee; James B McAlpine; Surafel Mulugeta; Suhair Sunoqrot; Yuehong Wang; Seung-Hwan Yang; Tae-Mi Yoon; Alfred L Goldberg; Guido F Pauli; Joo-Won Suh; Scott G Franzblau; Sanghyun Cho
Journal:  Antimicrob Agents Chemother       Date:  2014-11-24       Impact factor: 5.191

4.  Mechanical disruption of lysis-resistant bacterial cells by use of a miniature, low-power, disposable device.

Authors:  Peter E Vandeventer; Kris M Weigel; Jose Salazar; Barbara Erwin; Bruce Irvine; Robert Doebler; Ali Nadim; Gerard A Cangelosi; Angelika Niemz
Journal:  J Clin Microbiol       Date:  2011-05-04       Impact factor: 5.948

5.  RNase HI Depletion Strongly Potentiates Cell Killing by Rifampicin in Mycobacteria.

Authors:  Abeer Al-Zubaidi; Chen-Yi Cheung; Gregory M Cook; George Taiaroa; Valerie Mizrahi; J Shaun Lott; Stephanie S Dawes
Journal:  Antimicrob Agents Chemother       Date:  2022-09-26       Impact factor: 5.938

6.  Novel Screening System of Virulent Strains for the Establishment of a Mycobacterium avium Complex Lung Disease Mouse Model Using Whole-Genome Sequencing.

Authors:  Koji Furuuchi; Shintaro Seto; Hajime Nakamura; Haruka Hikichi; Akiko Miyabayashi; Keiko Wakabayashi; Kazue Mizuno; Teruaki Oka; Kozo Morimoto; Minako Hijikata; Naoto Keicho
Journal:  Microbiol Spectr       Date:  2022-05-17

7.  PhdA Catalyzes the First Step of Phenazine-1-Carboxylic Acid Degradation in Mycobacterium fortuitum.

Authors:  Kyle C Costa; Leon S Moskatel; Lucas A Meirelles; Dianne K Newman
Journal:  J Bacteriol       Date:  2018-04-24       Impact factor: 3.490

8.  ESX-1-Independent Horizontal Gene Transfer by Mycobacterium tuberculosis Complex Strains.

Authors:  Jan Madacki; Mickael Orgeur; Guillem Mas Fiol; Wafa Frigui; Laurence Ma; Roland Brosch
Journal:  mBio       Date:  2021-05-18       Impact factor: 7.867

9.  Genetic diversity of Mycobacterium tuberculosis from Guadalajara, Mexico and identification of a rare multidrug resistant Beijing genotype.

Authors:  Samantha Flores-Treviño; Rayo Morfín-Otero; Eduardo Rodríguez-Noriega; Esteban González-Díaz; Héctor R Pérez-Gómez; Virgilio Bocanegra-García; Lucio Vera-Cabrera; Elvira Garza-González
Journal:  PLoS One       Date:  2015-02-19       Impact factor: 3.240

10.  Identification of new drug targets and resistance mechanisms in Mycobacterium tuberculosis.

Authors:  Thomas R Ioerger; Theresa O'Malley; Reiling Liao; Kristine M Guinn; Mark J Hickey; Nilofar Mohaideen; Kenan C Murphy; Helena I M Boshoff; Valerie Mizrahi; Eric J Rubin; Christopher M Sassetti; Clifton E Barry; David R Sherman; Tanya Parish; James C Sacchettini
Journal:  PLoS One       Date:  2013-09-23       Impact factor: 3.240

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