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Literature DB >> 20559375

Genomics: The tale of our other genome.

Liping Zhao.

Abstract

Mesh：

Year: 2010 PMID： 20559375 DOI： 10.1038/465879a

Source DB: PubMed Journal: Nature ISSN： 0028-0836 Impact factor: 49.962

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8 in total

1. Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.

Authors: Yann Marcy; Cleber Ouverney; Elisabeth M Bik; Tina Lösekann; Natalia Ivanova; Hector Garcia Martin; Ernest Szeto; Darren Platt; Philip Hugenholtz; David A Relman; Stephen R Quake
Journal: Proc Natl Acad Sci U S A Date: 2007-07-09 Impact factor: 11.205

2. A human gut microbial gene catalogue established by metagenomic sequencing.

Authors: Junjie Qin; Ruiqiang Li; Jeroen Raes; Manimozhiyan Arumugam; Kristoffer Solvsten Burgdorf; Chaysavanh Manichanh; Trine Nielsen; Nicolas Pons; Florence Levenez; Takuji Yamada; Daniel R Mende; Junhua Li; Junming Xu; Shaochuan Li; Dongfang Li; Jianjun Cao; Bo Wang; Huiqing Liang; Huisong Zheng; Yinlong Xie; Julien Tap; Patricia Lepage; Marcelo Bertalan; Jean-Michel Batto; Torben Hansen; Denis Le Paslier; Allan Linneberg; H Bjørn Nielsen; Eric Pelletier; Pierre Renault; Thomas Sicheritz-Ponten; Keith Turner; Hongmei Zhu; Chang Yu; Shengting Li; Min Jian; Yan Zhou; Yingrui Li; Xiuqing Zhang; Songgang Li; Nan Qin; Huanming Yang; Jian Wang; Søren Brunak; Joel Doré; Francisco Guarner; Karsten Kristiansen; Oluf Pedersen; Julian Parkhill; Jean Weissenbach; Peer Bork; S Dusko Ehrlich; Jun Wang
Journal: Nature Date: 2010-03-04 Impact factor: 49.962

3. A catalog of reference genomes from the human microbiome.

Authors: Karen E Nelson; George M Weinstock; Sarah K Highlander; Kim C Worley; Heather Huot Creasy; Jennifer Russo Wortman; Douglas B Rusch; Makedonka Mitreva; Erica Sodergren; Asif T Chinwalla; Michael Feldgarden; Dirk Gevers; Brian J Haas; Ramana Madupu; Doyle V Ward; Bruce W Birren; Richard A Gibbs; Barbara Methe; Joseph F Petrosino; Robert L Strausberg; Granger G Sutton; Owen R White; Richard K Wilson; Scott Durkin; Michelle Gwinn Giglio; Sharvari Gujja; Clint Howarth; Chinnappa D Kodira; Nikos Kyrpides; Teena Mehta; Donna M Muzny; Matthew Pearson; Kymberlie Pepin; Amrita Pati; Xiang Qin; Chandri Yandava; Qiandong Zeng; Lan Zhang; Aaron M Berlin; Lei Chen; Theresa A Hepburn; Justin Johnson; Jamison McCorrison; Jason Miller; Pat Minx; Chad Nusbaum; Carsten Russ; Sean M Sykes; Chad M Tomlinson; Sarah Young; Wesley C Warren; Jonathan Badger; Jonathan Crabtree; Victor M Markowitz; Joshua Orvis; Andrew Cree; Steve Ferriera; Lucinda L Fulton; Robert S Fulton; Marcus Gillis; Lisa D Hemphill; Vandita Joshi; Christie Kovar; Manolito Torralba; Kris A Wetterstrand; Amr Abouellleil; Aye M Wollam; Christian J Buhay; Yan Ding; Shannon Dugan; Michael G FitzGerald; Mike Holder; Jessica Hostetler; Sandra W Clifton; Emma Allen-Vercoe; Ashlee M Earl; Candace N Farmer; Konstantinos Liolios; Michael G Surette; Qiang Xu; Craig Pohl; Katarzyna Wilczek-Boney; Dianhui Zhu
Journal: Science Date: 2010-05-21 Impact factor: 47.728

4. Mechanisms underlying the resistance to diet-induced obesity in germ-free mice.

Authors: Fredrik Bäckhed; Jill K Manchester; Clay F Semenkovich; Jeffrey I Gordon
Journal: Proc Natl Acad Sci U S A Date: 2007-01-08 Impact factor: 11.205

Review 5. Microbial ecology of the gastrointestinal tract.

Authors: D C Savage
Journal: Annu Rev Microbiol Date: 1977 Impact factor: 15.500

6. Metabolic endotoxemia initiates obesity and insulin resistance.

Authors: Patrice D Cani; Jacques Amar; Miguel Angel Iglesias; Marjorie Poggi; Claude Knauf; Delphine Bastelica; Audrey M Neyrinck; Francesca Fava; Kieran M Tuohy; Chantal Chabo; Aurélie Waget; Evelyne Delmée; Béatrice Cousin; Thierry Sulpice; Bernard Chamontin; Jean Ferrières; Jean-François Tanti; Glenn R Gibson; Louis Casteilla; Nathalie M Delzenne; Marie Christine Alessi; Rémy Burcelin
Journal: Diabetes Date: 2007-04-24 Impact factor: 9.461

7. Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice.

Authors: Chenhong Zhang; Menghui Zhang; Shengyue Wang; Ruijun Han; Youfang Cao; Weiying Hua; Yuejian Mao; Xiaojun Zhang; Xiaoyan Pang; Chaochun Wei; Guoping Zhao; Yan Chen; Liping Zhao
Journal: ISME J Date: 2009-10-29 Impact factor: 10.302

8. Symbiotic gut microbes modulate human metabolic phenotypes.

Authors: Min Li; Baohong Wang; Menghui Zhang; Mattias Rantalainen; Shengyue Wang; Haokui Zhou; Yan Zhang; Jian Shen; Xiaoyan Pang; Meiling Zhang; Hua Wei; Yu Chen; Haifeng Lu; Jian Zuo; Mingming Su; Yunping Qiu; Wei Jia; Chaoni Xiao; Leon M Smith; Shengli Yang; Elaine Holmes; Huiru Tang; Guoping Zhao; Jeremy K Nicholson; Lanjuan Li; Liping Zhao
Journal: Proc Natl Acad Sci U S A Date: 2008-02-05 Impact factor: 11.205

8 in total

19 in total

1. Self portraits. Gut microbiology.

Authors: Vk Viswanathan
Journal: Gut Microbes Date: 2010 Nov-Dec

Review 2. The microbiome and rheumatoid arthritis.

Authors: Jose U Scher; Steven B Abramson
Journal: Nat Rev Rheumatol Date: 2011-08-23 Impact factor: 20.543

3. Metagenomics: a quantum jump from bacterial genomics.

Authors: Puja Gupta; Jyoti Vakhlu
Journal: Indian J Microbiol Date: 2011-09-17 Impact factor: 2.461

4. Complete genome and bimodal genomic structure of the amoebal symbiont Neochlamydia strain S13 revealed by ultra-long reads obtained from MinION.

Authors: Junya Yamagishi; Kyoko Hayashida; Junji Matsuo; Torahiko Okubo; Makoto Kuroda; Hiroki Nagai; Tsuyoshi Sekizuka; Hiroyuki Yamaguchi; Chihiro Sugimoto
Journal: J Hum Genet Date: 2019-11-14 Impact factor: 3.172

Genomics: The tale of our other genome.

1. Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.

2. A human gut microbial gene catalogue established by metagenomic sequencing.

3. A catalog of reference genomes from the human microbiome.

4. Mechanisms underlying the resistance to diet-induced obesity in germ-free mice.

Review 5. Microbial ecology of the gastrointestinal tract.

6. Metabolic endotoxemia initiates obesity and insulin resistance.

7. Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice.

8. Symbiotic gut microbes modulate human metabolic phenotypes.

1. Self portraits. Gut microbiology.

Review 2. The microbiome and rheumatoid arthritis.

3. Metagenomics: a quantum jump from bacterial genomics.

4. Complete genome and bimodal genomic structure of the amoebal symbiont Neochlamydia strain S13 revealed by ultra-long reads obtained from MinION.

Review 5. Predictive, personalized, preventive, participatory (P4) cancer medicine.

Review 6. The genetic backgrounds in nonalcoholic fatty liver disease.

7. Distribution and gene mutation of enteric flora carrying β-glucuronidase among patients with colorectal cancer.

Review 8. Resistance and tolerance to foreign elements by prokaryotic immune systems - curating the genome.

Review 9. Microbiome in Inflammatory Arthritis and Human Rheumatic Diseases.

Review 10. The Roles of the Gut Microbiota and Chronic Low-Grade Inflammation in Older Adults With Frailty.