Literature DB >> 20554613

Homozygosity mapping in patients with cone-rod dystrophy: novel mutations and clinical characterizations.

Karin W Littink1, Robert K Koenekoop, L Ingeborgh van den Born, Rob W J Collin, Luminita Moruz, Joris A Veltman, Susanne Roosing, Marijke N Zonneveld, Amer Omar, Mahshad Darvish, Irma Lopez, Hester Y Kroes, Maria M van Genderen, Carel B Hoyng, Klaus Rohrschneider, Mary J van Schooneveld, Frans P M Cremers, Anneke I den Hollander.   

Abstract

PURPOSE: To determine the genetic defect and to describe the clinical characteristics in a cohort of mainly nonconsanguineous cone-rod dystrophy (CRD) patients.
METHODS: One hundred thirty-nine patients with diagnosed CRD were recruited. Ninety of them were screened for known mutations in ABCA4, and those carrying one or two mutations were excluded from further research. Genome-wide homozygosity mapping was performed in the remaining 108. Known genes associated with autosomal recessive retinal dystrophies located within a homozygous region were screened for mutations. Patients in whom a mutation was detected underwent further ophthalmic examination.
RESULTS: Homozygous sequence variants were identified in eight CRD families, six of which were nonconsanguineous. The variants were detected in the following six genes: ABCA4, CABP4, CERKL, EYS, KCNV2, and PROM1. Patients carrying mutations in ABCA4, CERKL, and PROM1 had typical CRD symptoms, but a variety of retinal appearances on funduscopy, optical coherence tomography, and autofluorescence imaging.
CONCLUSIONS: Homozygosity mapping led to the identification of new mutations in consanguineous and nonconsanguineous patients with retinal dystrophy. Detailed clinical characterization revealed a variety of retinal appearances, ranging from nearly normal to extensive retinal remodeling, retinal thinning, and debris accumulation. Although CRD was initially diagnosed in all patients, the molecular findings led to a reappraisal of the diagnosis in patients carrying mutations in EYS, CABP4, and KCNV2.

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Year:  2010        PMID: 20554613      PMCID: PMC3061516          DOI: 10.1167/iovs.10-5797

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  49 in total

1.  Primer3 on the WWW for general users and for biologist programmers.

Authors:  S Rozen; H Skaletsky
Journal:  Methods Mol Biol       Date:  2000

2.  The ABCA4 gene in autosomal recessive cone-rod dystrophies.

Authors:  Dominique Ducroq; Jean-Michel Rozet; Sylvie Gerber; Isabelle Perrault; Dabienne Barbet; Sylvain Hanein; Selim Hakiki; Jean-Louis Dufier; Arnold Munnich; Christian Hamel; Josseline Kaplan
Journal:  Am J Hum Genet       Date:  2002-12       Impact factor: 11.025

3.  Evidence of RPGRIP1 gene mutations associated with recessive cone-rod dystrophy.

Authors:  A Hameed; A Abid; A Aziz; M Ismail; S Q Mehdi; S Khaliq
Journal:  J Med Genet       Date:  2003-08       Impact factor: 6.318

4.  Phenotypic spectrum of autosomal recessive cone-rod dystrophies caused by mutations in the ABCA4 (ABCR) gene.

Authors:  B Jeroen Klevering; Anita Blankenagel; Alessandra Maugeri; Frans P M Cremers; Carel B Hoyng; Klaus Rohrschneider
Journal:  Invest Ophthalmol Vis Sci       Date:  2002-06       Impact factor: 4.799

5.  Novel locus for autosomal recessive cone-rod dystrophy CORD8 mapping to chromosome 1q12-Q24.

Authors:  S Khaliq; A Hameed; M Ismail; K Anwar; B P Leroy; S Q Mehdi; A M Payne; S S Bhattacharya
Journal:  Invest Ophthalmol Vis Sci       Date:  2000-11       Impact factor: 4.799

6.  Mutations in the ABCA4 (ABCR) gene are the major cause of autosomal recessive cone-rod dystrophy.

Authors:  A Maugeri; B J Klevering; K Rohrschneider; A Blankenagel; H G Brunner; A F Deutman; C B Hoyng; F P Cremers
Journal:  Am J Hum Genet       Date:  2000-08-24       Impact factor: 11.025

7.  Predicting phenotype in steroid 21-hydroxylase deficiency? Comprehensive genotyping in 155 unrelated, well defined patients from southern Germany.

Authors:  N Krone; A Braun; A A Roscher; D Knorr; H P Schwarz
Journal:  J Clin Endocrinol Metab       Date:  2000-03       Impact factor: 5.958

8.  CNGA3 mutations in hereditary cone photoreceptor disorders.

Authors:  B Wissinger; D Gamer; H Jägle; R Giorda; T Marx; S Mayer; S Tippmann; M Broghammer; B Jurklies; T Rosenberg; S G Jacobson; E C Sener; S Tatlipinar; C B Hoyng; C Castellan; P Bitoun; S Andreasson; G Rudolph; U Kellner; B Lorenz; G Wolff; C Verellen-Dumoulin; M Schwartz; F P Cremers; E Apfelstedt-Sylla; E Zrenner; R Salati; L T Sharpe; S Kohl
Journal:  Am J Hum Genet       Date:  2001-08-30       Impact factor: 11.025

9.  ABCA4 gene sequence variations in patients with autosomal recessive cone-rod dystrophy.

Authors:  Gerald A Fishman; Edwin M Stone; David A Eliason; Chris M Taylor; Martin Lindeman; Deborah J Derlacki
Journal:  Arch Ophthalmol       Date:  2003-06

10.  Clinical subtypes of cone-rod dystrophy.

Authors:  J P Szlyk; G A Fishman; K R Alexander; N S Peachey; D J Derlacki
Journal:  Arch Ophthalmol       Date:  1993-06
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  45 in total

1.  ABCA4 gene screening by next-generation sequencing in a British cohort.

Authors:  Kaoru Fujinami; Jana Zernant; Ravinder K Chana; Genevieve A Wright; Kazushige Tsunoda; Yoko Ozawa; Kazuo Tsubota; Andrew R Webster; Anthony T Moore; Rando Allikmets; Michel Michaelides
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-10-11       Impact factor: 4.799

2.  Deletion of the transmembrane protein Prom1b in zebrafish disrupts outer-segment morphogenesis and causes photoreceptor degeneration.

Authors:  Zhaojing Lu; Xuebin Hu; James Reilly; Danna Jia; Fei Liu; Shanshan Yu; Xiliang Liu; Shanglun Xie; Zhen Qu; Yayun Qin; Yuwen Huang; Yuexia Lv; Jingzhen Li; Pan Gao; Fulton Wong; Xinhua Shu; Zhaohui Tang; Mugen Liu
Journal:  J Biol Chem       Date:  2019-07-30       Impact factor: 5.157

3.  Homozygosity mapping and whole-genome sequencing reveals a deep intronic PROM1 mutation causing cone-rod dystrophy by pseudoexon activation.

Authors:  Anja K Mayer; Klaus Rohrschneider; Tim M Strom; Nicola Glöckle; Susanne Kohl; Bernd Wissinger; Nicole Weisschuh
Journal:  Eur J Hum Genet       Date:  2015-07-08       Impact factor: 4.246

Review 4.  Human genetic disorders of sphingolipid biosynthesis.

Authors:  Leonardo Astudillo; Frédérique Sabourdy; Nicole Therville; Heiko Bode; Bruno Ségui; Nathalie Andrieu-Abadie; Thorsten Hornemann; Thierry Levade
Journal:  J Inherit Metab Dis       Date:  2014-08-21       Impact factor: 4.982

5.  The Rapid-Onset Chorioretinopathy Phenotype of ABCA4 Disease.

Authors:  Koji Tanaka; Winston Lee; Jana Zernant; Kaspar Schuerch; Lyam Ciccone; Stephen H Tsang; Janet R Sparrow; Rando Allikmets
Journal:  Ophthalmology       Date:  2017-09-22       Impact factor: 12.079

6.  Molecular Heterogeneity Within the Clinical Diagnosis of Pericentral Retinal Degeneration.

Authors:  Rodrigo Matsui; Artur V Cideciyan; Sharon B Schwartz; Alexander Sumaroka; Alejandro J Roman; Malgorzata Swider; Wei Chieh Huang; Rebecca Sheplock; Samuel G Jacobson
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-09       Impact factor: 4.799

7.  Expression and localization of CERKL in the mammalian retina, its response to light-stress, and relationship with NeuroD1 gene.

Authors:  Nawajes A Mandal; Julie-Thu A Tran; Anisse Saadi; Abul K Rahman; Tuan-Phat Huynh; William H Klein; Jang-Hyeon Cho
Journal:  Exp Eye Res       Date:  2012-11-08       Impact factor: 3.467

Review 8.  Mouse b-wave mutants.

Authors:  Machelle T Pardue; Neal S Peachey
Journal:  Doc Ophthalmol       Date:  2014-01-07       Impact factor: 2.379

Review 9.  Genomic approaches for the discovery of genes mutated in inherited retinal degeneration.

Authors:  Anna M Siemiatkowska; Rob W J Collin; Anneke I den Hollander; Frans P M Cremers
Journal:  Cold Spring Harb Perspect Med       Date:  2014-06-17       Impact factor: 6.915

10.  Homozygous missense variant in the human CNGA3 channel causes cone-rod dystrophy.

Authors:  Rehan S Shaikh; Peggy Reuter; Robert A Sisk; Tasleem Kausar; Mohsin Shahzad; Muhammad I Maqsood; Ateeq Yousif; Muhammad Ali; Saima Riazuddin; Bernd Wissinger; Zubair M Ahmed
Journal:  Eur J Hum Genet       Date:  2014-07-23       Impact factor: 4.246

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