Literature DB >> 20551308

Mechanism of inhibition of aliphatic epoxide carboxylation by the coenzyme M analog 2-bromoethanesulfonate.

Jeffrey M Boyd1, Daniel D Clark, Melissa A Kofoed, Scott A Ensign.   

Abstract

The bacterial metabolism of epoxypropane formed from propylene oxidation uses the atypical cofactor coenzyme M (CoM, 2-mercaptoethanesulfonate) as the nucleophile for epoxide ring opening and as a carrier of intermediates that undergo dehydrogenation, reductive cleavage, and carboxylation to form acetoacetate in a three-step metabolic pathway. 2-Ketopropyl-CoM carboxylase/oxidoreductase (2-KPCC), the terminal enzyme of this pathway, is the only known member of the disulfide oxidoreductase family of enzymes that is a carboxylase. In the present work, the CoM analog 2-bromoethanesulfonate (BES) is shown to be a reversible inhibitor of 2-KPCC and hydroxypropyl-CoM dehydrogenase but not of epoxyalkane:CoM transferase. Further investigations revealed that BES is a time-dependent inactivator of dithiothreitol-reduced 2-KPCC, where the redox active cysteines are in the free thiol forms. BES did not inactivate air-oxidized 2-KPCC, where the redox active cysteine pair is in the disulfide form. The inactivation of 2-KPCC exhibited saturation kinetics, and CoM slowed the rate of inactivation. Mass spectral analysis demonstrated that BES inactivation of reduced 2-KPCC occurs with covalent modification of the interchange thiol (Cys(82)) by a group with a molecular mass identical to that of ethylsulfonate. The flavin thiol Cys(87) was not alkylated by BES under reducing conditions, and no amino acid residues were modified by BES in the oxidized enzyme. The UV-visible spectrum of BES-modifed 2-KPCC showed the characteristic charge transfer absorbance expected with alkylation at Cys(82). These results identify BES as a reactive CoM analog that specifically alkylates the interchange thiol that facilitates thioether bond cleavage and enolacetone formation during catalysis.

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Year:  2010        PMID: 20551308      PMCID: PMC2919086          DOI: 10.1074/jbc.M110.144410

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  25 in total

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Authors:  K Krüger; G Lang; T Weidner; A M Engel
Journal:  Appl Microbiol Biotechnol       Date:  1999-11       Impact factor: 4.813

Review 2.  Microbial metabolism of aliphatic alkenes.

Authors:  S A Ensign
Journal:  Biochemistry       Date:  2001-05-22       Impact factor: 3.162

3.  Structural basis for CO2 fixation by a novel member of the disulfide oxidoreductase family of enzymes, 2-ketopropyl-coenzyme M oxidoreductase/carboxylase.

Authors:  Boguslaw Nocek; Se Bok Jang; Mi Suk Jeong; Daniel D Clark; Scott A Ensign; John W Peters
Journal:  Biochemistry       Date:  2002-10-29       Impact factor: 3.162

4.  Mercuric reductase: homology to glutathione reductase and lipoamide dehydrogenase. Iodoacetamide alkylation and sequence of the active site peptide.

Authors:  B S Fox; C T Walsh
Journal:  Biochemistry       Date:  1983-08-16       Impact factor: 3.162

5.  Statistical analysis of enzyme kinetic data.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

6.  Characterization of 2-bromoethanesulfonate as a selective inhibitor of the coenzyme m-dependent pathway and enzymes of bacterial aliphatic epoxide metabolism.

Authors:  Jeffrey M Boyd; Ashley Ellsworth; Scott A Ensign
Journal:  J Bacteriol       Date:  2006-09-22       Impact factor: 3.490

7.  ATP-dependent enolization of acetone by acetone carboxylase from Rhodobacter capsulatus.

Authors:  Jeffrey M Boyd; Scott A Ensign
Journal:  Biochemistry       Date:  2005-06-14       Impact factor: 3.162

8.  Spectroscopic and kinetic studies of the reaction of bromopropanesulfonate with methyl-coenzyme M reductase.

Authors:  Ryan C Kunz; Yih-Chern Horng; Stephen W Ragsdale
Journal:  J Biol Chem       Date:  2006-09-11       Impact factor: 5.157

9.  Characterization of three protein components required for functional reconstitution of the epoxide carboxylase multienzyme complex from Xanthobacter strain Py2.

Authors:  J R Allen; S A Ensign
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

10.  Kinetic and microcalorimetric analysis of substrate and cofactor interactions in epoxyalkane:CoM transferase, a zinc-dependent epoxidase.

Authors:  Jonathan G Krum; Heather Ellsworth; Ryan R Sargeant; Gregory Rich; Scott A Ensign
Journal:  Biochemistry       Date:  2002-04-16       Impact factor: 3.162

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  3 in total

1.  Roles of the redox-active disulfide and histidine residues forming a catalytic dyad in reactions catalyzed by 2-ketopropyl coenzyme M oxidoreductase/carboxylase.

Authors:  Melissa A Kofoed; David A Wampler; Arti S Pandey; John W Peters; Scott A Ensign
Journal:  J Bacteriol       Date:  2011-07-15       Impact factor: 3.490

2.  The reactive form of a C-S bond-cleaving, CO2-fixing flavoenzyme.

Authors:  Bennett R Streit; Jenna R Mattice; Gregory A Prussia; John W Peters; Jennifer L DuBois
Journal:  J Biol Chem       Date:  2019-01-29       Impact factor: 5.157

3.  Metabolism of 2-methylpropene (isobutylene) by the aerobic bacterium Mycobacterium sp. strain ELW1.

Authors:  Samanthi Kottegoda; Elizabeth Waligora; Michael Hyman
Journal:  Appl Environ Microbiol       Date:  2015-01-09       Impact factor: 4.792

  3 in total

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