Literature DB >> 20544298

Liver segmentation for contrast-enhanced MR images using partitioned probabilistic model.

László Ruskó1, György Bekes.   

Abstract

PURPOSE: Liver volume segmentation is important in computer assisted diagnosis and therapy planning of liver tumors. Manual segmentation is time-consuming, tedious and error prone, so automated methods are needed. Automatic segmentation of MR images is more challenging than for CT images, so a robust system was developed.
METHODS: An intensity-based segmentation method that uses probabilistic model to increase the precision of the segmentation was developed. The model was build based on 60 manually contoured liver CT exams and partitioned into 8 parts according to the (Couinaud) segmental anatomy of the liver. The partitioning allows using different intensity statistics in different parts of the organ, which makes it insensitive to local intensity differences from MR artifacts or pathology. The method employs a modality independent model with registration that exploits some LAVA image characteristics. This dependence can be eliminated to adapt the segmentation method for a wide range of MR images.
RESULTS: The method was evaluated using eight representative, manually segmented MR LAVA exams. The results show that the method can accurately segment the liver volume despite various MR artifacts and pathology. The evaluation shows that the proposed method provides more precise segmentation (6% average absolute relative volume error) compared with global intensity statistics for the whole organ (20% average absolute relative volume error). The compute time of the method was 30 s in average, which is acceptable for wide range of clinical applications.
CONCLUSION: An automatic method that can segment the liver in contrast-enhanced MR LAVA images was developed and tested. The results demonstrate that the method is feasible, efficient and robust to artifacts and pathology.

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Year:  2010        PMID: 20544298     DOI: 10.1007/s11548-010-0493-9

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  7 in total

1.  Liver and spleen volumetry with quantitative MR imaging and dual-space clustering segmentation.

Authors:  Steven W Farraher; Hernan Jara; Kevin J Chang; Andrew Hou; Jorge A Soto
Journal:  Radiology       Date:  2005-08-26       Impact factor: 11.105

2.  Minimal shape and intensity cost path segmentation.

Authors:  Dieter Seghers; Dirk Loeckx; Frederik Maes; Dirk Vandermeulen; Paul Suetens
Journal:  IEEE Trans Med Imaging       Date:  2007-08       Impact factor: 10.048

3.  Automatic segmentation of the liver from multi- and single-phase contrast-enhanced CT images.

Authors:  László Ruskó; György Bekes; Márta Fidrich
Journal:  Med Image Anal       Date:  2009-07-23       Impact factor: 8.545

Review 4.  Statistical shape models for 3D medical image segmentation: a review.

Authors:  Tobias Heimann; Hans-Peter Meinzer
Journal:  Med Image Anal       Date:  2009-05-27       Impact factor: 8.545

5.  Surgical anatomy and anatomical surgery of the liver.

Authors:  H Bismuth
Journal:  World J Surg       Date:  1982-01       Impact factor: 3.352

6.  Liver segmentation in living liver transplant donors: comparison of semiautomatic and manual methods.

Authors:  Laurent Hermoye; Ismael Laamari-Azjal; Zhujiang Cao; Laurence Annet; Jan Lerut; Benoit M Dawant; Bernard E Van Beers
Journal:  Radiology       Date:  2004-11-24       Impact factor: 11.105

7.  Comparison and evaluation of methods for liver segmentation from CT datasets.

Authors:  Tobias Heimann; Bram van Ginneken; Martin A Styner; Yulia Arzhaeva; Volker Aurich; Christian Bauer; Andreas Beck; Christoph Becker; Reinhard Beichel; György Bekes; Fernando Bello; Gerd Binnig; Horst Bischof; Alexander Bornik; Peter M M Cashman; Ying Chi; Andrés Cordova; Benoit M Dawant; Márta Fidrich; Jacob D Furst; Daisuke Furukawa; Lars Grenacher; Joachim Hornegger; Dagmar Kainmüller; Richard I Kitney; Hidefumi Kobatake; Hans Lamecker; Thomas Lange; Jeongjin Lee; Brian Lennon; Rui Li; Senhu Li; Hans-Peter Meinzer; Gábor Nemeth; Daniela S Raicu; Anne-Mareike Rau; Eva M van Rikxoort; Mikaël Rousson; László Rusko; Kinda A Saddi; Günter Schmidt; Dieter Seghers; Akinobu Shimizu; Pieter Slagmolen; Erich Sorantin; Grzegorz Soza; Ruchaneewan Susomboon; Jonathan M Waite; Andreas Wimmer; Ivo Wolf
Journal:  IEEE Trans Med Imaging       Date:  2009-02-10       Impact factor: 10.048

  7 in total
  6 in total

1.  Fully automated MR liver volumetry using watershed segmentation coupled with active contouring.

Authors:  Hieu Trung Huynh; Ngoc Le-Trong; Pham The Bao; Aytek Oto; Kenji Suzuki
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-11-21       Impact factor: 2.924

2.  Computerized segmentation of liver in hepatic CT and MRI by means of level-set geodesic active contouring.

Authors:  Kenji Suzuki; Hieu Trung Huynh; Yipeng Liu; Dominic Calabrese; Karen Zhou; Aytekin Oto; Masatoshi Hori
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2013

3.  Automated liver lesion detection in CT images based on multi-level geometric features.

Authors:  László Ruskó; Ádám Perényi
Journal:  Int J Comput Assist Radiol Surg       Date:  2013-10-05       Impact factor: 2.924

4.  Computerized liver volumetry on MRI by using 3D geodesic active contour segmentation.

Authors:  Hieu Trung Huynh; Ibrahim Karademir; Aytekin Oto; Kenji Suzuki
Journal:  AJR Am J Roentgenol       Date:  2014-01       Impact factor: 3.959

5.  Functional Region Annotation of Liver CT Image Based on Vascular Tree.

Authors:  Yufei Chen; Xiaodong Yue; Caiming Zhong; Gang Wang
Journal:  Biomed Res Int       Date:  2016-11-07       Impact factor: 3.411

Review 6.  Liver segmentation: indications, techniques and future directions.

Authors:  Akshat Gotra; Lojan Sivakumaran; Gabriel Chartrand; Kim-Nhien Vu; Franck Vandenbroucke-Menu; Claude Kauffmann; Samuel Kadoury; Benoît Gallix; Jacques A de Guise; An Tang
Journal:  Insights Imaging       Date:  2017-06-14
  6 in total

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