Literature DB >> 20543431

Grid-wide neuroimaging data federation in the context of the NeuroLOG project.

Franck Michel1, Alban Gaignard, Farooq Ahmad, Christian Barillot, Bénédicte Batrancourt, Michel Dojat, Bernard Gibaud, Pascal Girard, David Godard, Gilles Kassel, Diane Lingrand, Grégoire Malandain, Johan Montagnat, Mélanie Pélégrini-Issac, Xavier Pennec, Javier Rojas Balderrama, Bacem Wali.   

Abstract

Grid technologies are appealing to deal with the challenges raised by computational neurosciences and support multi-centric brain studies. However, core grids middleware hardly cope with the complex neuroimaging data representation and multi-layer data federation needs. Moreover, legacy neuroscience environments need to be preserved and cannot be simply superseded by grid services. This paper describes the NeuroLOG platform design and implementation, shedding light on its Data Management Layer. It addresses the integration of brain image files, associated relational metadata and neuroscience semantic data in a heterogeneous distributed environment, integrating legacy data managers through a mediation layer.

Mesh:

Year:  2010        PMID: 20543431      PMCID: PMC2938713     

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  7 in total

1.  Federating distributed and heterogeneous information sources in neuroimaging: the NeuroBase Project.

Authors:  C Barillot; H Benali; M Dojat; A Gaignard; B Gibaud; S Kinkingnéhun; J-P Matsumoto; M Pélégrini-Issac; E Simon; L Temal
Journal:  Stud Health Technol Inform       Date:  2006

2.  Globus MEDICUS - federation of DICOM medical imaging devices into healthcare Grids.

Authors:  Stephan G Erberich; Jonathan C Silverstein; Ann Chervenak; Robert Schuler; Marvin D Nelson; Carl Kesselman
Journal:  Stud Health Technol Inform       Date:  2007

3.  Towards an ontology for sharing medical images and regions of interest in neuroimaging.

Authors:  Lynda Temal; Michel Dojat; Gilles Kassel; Bernard Gibaud
Journal:  J Biomed Inform       Date:  2008-03-17       Impact factor: 6.317

4.  A distributed security policy for neuroradiology data sharing.

Authors:  Alban Gaignard; Johan Montagnat
Journal:  Stud Health Technol Inform       Date:  2009

5.  Using grid-enabled distributed metadata database to index DICOM-SR.

Authors:  Ignacio Blanquer; Vicente Hernandez; José Salavert; Damià Segrelles
Journal:  Stud Health Technol Inform       Date:  2009

6.  Reusable services from the neuGRID project for grid-based health applications.

Authors:  Ashiq Anjum; Peter Bloodsworth; Irfan Habib; Tom Lansdale; Richard McClatchey; Yasir Mehmood
Journal:  Stud Health Technol Inform       Date:  2009

7.  Baseline MRI predictors of conversion from MCI to probable AD in the ADNI cohort.

Authors:  Shannon L Risacher; Andrew J Saykin; John D West; Li Shen; Hiram A Firpi; Brenna C McDonald
Journal:  Curr Alzheimer Res       Date:  2009-08       Impact factor: 3.498

  7 in total
  2 in total

1.  NeuroLOG: sharing neuroimaging data using an ontology-based federated approach.

Authors:  Bernard Gibaud; Gilles Kassel; Michel Dojat; Bénédicte Batrancourt; Franck Michel; Alban Gaignard; Johan Montagnat
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  A multilayer ontology of instruments for neurological, behavioral and cognitive assessments.

Authors:  Bénédicte Batrancourt; Michel Dojat; Bernard Gibaud; Gilles Kassel
Journal:  Neuroinformatics       Date:  2015-01
  2 in total

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