Literature DB >> 20542067

Circadian rhythms in gene expression: Relationship to physiology, disease, drug disposition and drug action.

Siddharth Sukumaran1, Richard R Almon, Debra C DuBois, William J Jusko.   

Abstract

Circadian rhythms (24h cycles) are observed in virtually all aspects of mammalian function from expression of genes to complex physiological processes. The master clock is present in the suprachiasmatic nucleus (SCN) in the anterior part of the hypothalamus and controls peripheral clocks present in other parts of the body. Components of this core clock mechanism regulate the circadian rhythms in genome-wide mRNA expression, which in turn regulate various biological processes. Disruption of circadian rhythms can be either the cause or the effect of various disorders including metabolic syndrome, inflammatory diseases and cancer. Furthermore, circadian rhythms in gene expression regulate both the action and disposition of various drugs and affect therapeutic efficacy and toxicity based on dosing time. Understanding the regulation of circadian rhythms in gene expression plays an important role in both optimizing the dosing time for existing drugs and in the development of new therapeutics targeting the molecular clock. 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20542067      PMCID: PMC2922481          DOI: 10.1016/j.addr.2010.05.009

Source DB:  PubMed          Journal:  Adv Drug Deliv Rev        ISSN: 0169-409X            Impact factor:   15.470


  153 in total

1.  Circadian clock genes oscillate in human peripheral blood mononuclear cells.

Authors:  Diane B Boivin; Francine O James; Aibin Wu; Park F Cho-Park; Huabao Xiong; Zhong S Sun
Journal:  Blood       Date:  2003-07-31       Impact factor: 22.113

2.  Incidence of metabolic syndrome among night-shift healthcare workers.

Authors:  A Pietroiusti; A Neri; G Somma; L Coppeta; I Iavicoli; A Bergamaschi; A Magrini
Journal:  Occup Environ Med       Date:  2009-09-07       Impact factor: 4.402

3.  Salt-sensitive hypertension in circadian clock-deficient Cry-null mice involves dysregulated adrenal Hsd3b6.

Authors:  Masao Doi; Yukari Takahashi; Rie Komatsu; Fumiyoshi Yamazaki; Hiroyuki Yamada; Shogo Haraguchi; Noriaki Emoto; Yasushi Okuno; Gozoh Tsujimoto; Akihiro Kanematsu; Osamu Ogawa; Takeshi Todo; Kazuyoshi Tsutsui; Gijsbertus T J van der Horst; Hitoshi Okamura
Journal:  Nat Med       Date:  2009-12-13       Impact factor: 53.440

4.  A genome-wide RNAi screen for modifiers of the circadian clock in human cells.

Authors:  Eric E Zhang; Andrew C Liu; Tsuyoshi Hirota; Loren J Miraglia; Genevieve Welch; Pagkapol Y Pongsawakul; Xianzhong Liu; Ann Atwood; Jon W Huss; Jeff Janes; Andrew I Su; John B Hogenesch; Steve A Kay
Journal:  Cell       Date:  2009-09-17       Impact factor: 41.582

5.  Clock gene expression in the murine gastrointestinal tract: endogenous rhythmicity and effects of a feeding regimen.

Authors:  Willemijntje A Hoogerwerf; Helen L Hellmich; Germaine Cornélissen; Franz Halberg; Vahakn B Shahinian; Jonathon Bostwick; Tor C Savidge; Vincent M Cassone
Journal:  Gastroenterology       Date:  2007-07-12       Impact factor: 22.682

6.  Analysis of cell type-specific expression of CK1 epsilon in various tissues of young adult BALB/c Mice and in mammary tumors of SV40 T-Ag-transgenic mice.

Authors:  Anja C Utz; Heidrun Hirner; Annette Blatz; Andreas Hillenbrand; Bernhard Schmidt; Wolfgang Deppert; Doris Henne-Bruns; Dietmar Fischer; Dietmar R Thal; Frank Leithäuser; Uwe Knippschild
Journal:  J Histochem Cytochem       Date:  2009-09-15       Impact factor: 2.479

7.  Liver circadian clock, a pharmacologic target of cyclin-dependent kinase inhibitor seliciclib.

Authors:  Ida Iurisci; Elisabeth Filipski; Hatem Sallam; Francis Harper; Catherine Guettier; Irène Maire; Moustapha Hassan; Stefano Iacobelli; Francis Lévi
Journal:  Chronobiol Int       Date:  2009-08       Impact factor: 2.877

8.  Molecular clock is involved in predictive circadian adjustment of renal function.

Authors:  Annie Mercier Zuber; Gabriel Centeno; Sylvain Pradervand; Svetlana Nikolaeva; Lionel Maquelin; Léonard Cardinaux; Olivier Bonny; Dmitri Firsov
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-09       Impact factor: 11.205

9.  Casein Kinase I epsilon positively regulates the Akt pathway in breast cancer cell lines.

Authors:  Cristina Modak; Peter Bryant
Journal:  Biochem Biophys Res Commun       Date:  2008-02-08       Impact factor: 3.575

10.  Inhibition of casein kinase 1-epsilon induces cancer-cell-selective, PERIOD2-dependent growth arrest.

Authors:  Wan Seok Yang; Brent R Stockwell
Journal:  Genome Biol       Date:  2008-06-02       Impact factor: 13.583

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  51 in total

Review 1.  Sources of variance in baseline gene expression in the rodent liver.

Authors:  J Christopher Corton; Pierre R Bushel; Jennifer Fostel; Raegan B O'Lone
Journal:  Mutat Res       Date:  2012-01-05       Impact factor: 2.433

2.  Indirect pharmacodynamic models for responses with circadian removal.

Authors:  Vivaswath S Ayyar; Wojciech Krzyzanski; William J Jusko
Journal:  J Pharmacokinet Pharmacodyn       Date:  2019-01-29       Impact factor: 2.745

3.  Functional proteomic analysis of corticosteroid pharmacodynamics in rat liver: Relationship to hepatic stress, signaling, energy regulation, and drug metabolism.

Authors:  Vivaswath S Ayyar; Richard R Almon; Debra C DuBois; Siddharth Sukumaran; Jun Qu; William J Jusko
Journal:  J Proteomics       Date:  2017-03-14       Impact factor: 4.044

4.  Pharmacokinetic/pharmacodynamic modeling of methylprednisolone effects on iNOS mRNA expression and nitric oxide during LPS-induced inflammation in rats.

Authors:  Siddharth Sukumaran; Eve-Irene Lepist; Debra C DuBois; Richard R Almon; William J Jusko
Journal:  Pharm Res       Date:  2012-03-16       Impact factor: 4.200

5.  Adipose tissue-liver crosstalk during pathologic changes caused by vinyl chloride metabolites in mice.

Authors:  Brenna R Kaelin; Collin M McKenzie; Karl W Hempel; Anna L Lang; Gavin E Arteel; Juliane I Beier
Journal:  Toxicol Appl Pharmacol       Date:  2020-05-20       Impact factor: 4.219

6.  Alterations in gene expression after gamma-hydroxybutyric acid intake-A pilot study.

Authors:  Lena-Maria Mehling; Annika Spottke; Anna Heidbreder; Peter Young; Burkhard Madea; Cornelius Hess; Cornelius Courts
Journal:  Int J Legal Med       Date:  2017-05-22       Impact factor: 2.686

7.  Mechanistic Multi-Tissue Modeling of Glucocorticoid-Induced Leucine Zipper Regulation: Integrating Circadian Gene Expression with Receptor-Mediated Corticosteroid Pharmacodynamics.

Authors:  Vivaswath S Ayyar; Debra C DuBois; Richard R Almon; William J Jusko
Journal:  J Pharmacol Exp Ther       Date:  2017-07-20       Impact factor: 4.030

8.  Circadian signatures in rat liver: from gene expression to pathways.

Authors:  Meric A Ovacik; Siddharth Sukumaran; Richard R Almon; Debra C DuBois; William J Jusko; Ioannis P Androulakis
Journal:  BMC Bioinformatics       Date:  2010-11-01       Impact factor: 3.169

Review 9.  The mammalian clock and chronopharmacology.

Authors:  Kristine Griffett; Thomas P Burris
Journal:  Bioorg Med Chem Lett       Date:  2013-02-13       Impact factor: 2.823

Review 10.  Cycled light in the intensive care unit for preterm and low birth weight infants.

Authors:  Iris Morag; Arne Ohlsson
Journal:  Cochrane Database Syst Rev       Date:  2016-08-10
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