Literature DB >> 20541422

Leaving the structural ivory tower, assisted by interactive 3D PDF.

Pravin Kumar1, Alexander Ziegler, Alexander Grahn, Chee Seng Hee, Andreas Ziegler.   

Abstract

The ability to embed interactive three-dimensional (3D) models into electronic publications in portable document format (PDF) greatly enhances the accessibility of molecular structures. Here, we report advances in this procedure and discuss what is needed to develop this format into a truly useful tool for the structural biology community as well as for readers who are less well trained in molecular visualization. Copyright 2010 Elsevier Ltd. All rights reserved.

Mesh：

Year:  2010        PMID： 20541422     DOI： 10.1016/j.tibs.2010.03.008

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN： 0968-0004            Impact factor:   13.807


  17 in total

1.  Loss of recognition by cross-reactive T cells and its relation to a C-terminus-induced conformational reorientation of an HLA-B*2705-bound peptide.

Authors:  Bernhard Loll; Christine Rückert; Chee Seng Hee; Wolfram Saenger; Barbara Uchanska-Ziegler; Andreas Ziegler
Journal:  Protein Sci       Date:  2010-12-23       Impact factor: 6.725

2.  The structure of the CRISPR-associated protein Csa3 provides insight into the regulation of the CRISPR/Cas system.

Authors:  Nathanael G Lintner; Kenneth A Frankel; Susan E Tsutakawa; Donald L Alsbury; Valérie Copié; Mark J Young; John A Tainer; C Martin Lawrence
Journal:  J Mol Biol       Date:  2010-11-18       Impact factor: 5.469

3.  Form and function of the teleost lateral line revealed using three-dimensional imaging and computational fluid dynamics.

Authors:  Hendrik Herzog; Birgit Klein; Alexander Ziegler
Journal:  J R Soc Interface       Date:  2017-05       Impact factor: 4.118

4.  Enterotoxigenic Escherichia coli CS1 pilus: not one structure but several.

Authors:  Katrina T Forest
Journal:  J Bacteriol       Date:  2013-01-25       Impact factor: 3.490

5.  Communicating 3D data-interactive 3D PDF documents for expert reports and scientific publications in the field of forensic medicine.

Authors:  Sören Kottner; Patricia Mildred Flach; Dominic Gascho; Garyfalia Ampanozi; Michael Thali; Lars C Ebert
Journal:  Int J Legal Med       Date:  2019-10-10       Impact factor: 2.686

6.  Micro-computed tomography: Introducing new dimensions to taxonomy.

Authors:  Sarah Faulwetter; Aikaterini Vasileiadou; Michail Kouratoras; Christos Arvanitidis
Journal:  Zookeys       Date:  2013-02-04       Impact factor: 1.546

7.  The songbird syrinx morphome: a three-dimensional, high-resolution, interactive morphological map of the zebra finch vocal organ.

Authors:  Daniel N Düring; Alexander Ziegler; Christopher K Thompson; Andreas Ziegler; Cornelius Faber; Johannes Müller; Constance Scharff; Coen P H Elemans
Journal:  BMC Biol       Date:  2013-01-08       Impact factor: 7.431

8.  Origin and evolutionary plasticity of the gastric caecum in sea urchins (Echinodermata: Echinoidea).

Authors:  Alexander Ziegler; Rich Mooi; Gauthier Rolet; Chantal De Ridder
Journal:  BMC Evol Biol       Date:  2010-10-18       Impact factor: 3.260

9.  BEYOND THE PRINT-VIRTUAL PALEONTOLOGY IN SCIENCE PUBLISHING, OUTREACH, AND EDUCATION.

Authors:  Stephan Lautenschlager; Martin Rücklin
Journal:  J Paleontol       Date:  2014-07-01       Impact factor: 1.471

10.  A stomatin dimer modulates the activity of acid-sensing ion channels.

Authors:  Janko Brand; Ewan St J Smith; David Schwefel; Liudmila Lapatsina; Kate Poole; Damir Omerbašić; Alexey Kozlenkov; Joachim Behlke; Gary R Lewin; Oliver Daumke
Journal:  EMBO J       Date:  2012-07-31       Impact factor: 11.598
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