Literature DB >> 20540588

Attractive interactions between side chains of histidine-histidine and histidine-arginine-based cationic dipeptides in water.

Jan Heyda1, Philip E Mason, Pavel Jungwirth.   

Abstract

Molecular dynamics simulations of histidine-based dipeptides in water show that a protonated histidine side chain group has a propensity for forming like-charged contact pairs with another protonated histidine or with arginine. This effect is of similar strength to that in previously observed arginine-arginine pairing. Even stronger contact pairs are formed in singly protonated or deprotonated dihistidine, where stacking of aromatic rings is not weakened by Coulomb repulsion between the side chains. Similar pairing behavior is also observed in a mixed solution of imidazole and imidazolium chloride.

Entities:  

Mesh：

Substances：

Year:  2010        PMID： 20540588     DOI： 10.1021/jp101031v

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN： 1520-5207            Impact factor:   2.991


  24 in total

1.  GII.4 Norovirus Protease Shows pH-Sensitive Proteolysis with a Unique Arg-His Pairing in the Catalytic Site.

Authors:  Mariya A Viskovska; Boyang Zhao; Sreejesh Shanker; Jae-Mun Choi; Lisheng Deng; Yongchen Song; Timothy Palzkill; Liya Hu; Mary K Estes; B V Venkataram Prasad
Journal:  J Virol       Date:  2019-03-05       Impact factor: 5.103

2.  Membrane anchoring and interaction between transmembrane domains are crucial for K+ channel function.

Authors:  Manuela Gebhardt; Franziska Hoffgaard; Kay Hamacher; Stefan M Kast; Anna Moroni; Gerhard Thiel
Journal:  J Biol Chem       Date:  2011-02-10       Impact factor: 5.157

3.  Contrasting the Influence of Cationic Amino Acids on the Viscosity and Stability of a Highly Concentrated Monoclonal Antibody.

Authors:  Barton J Dear; Jessica J Hung; Thomas M Truskett; Keith P Johnston
Journal:  Pharm Res       Date:  2016-11-11       Impact factor: 4.200

4.  Interactions between ionizable amino acid side chains at a lipid bilayer-water interface.

Authors:  Olga Yuzlenko; Themis Lazaridis
Journal:  J Phys Chem B       Date:  2011-11-01       Impact factor: 2.991

5.  A structural basis for the biosynthesis of the major chlorogenic acids found in coffee.

Authors:  Laura A Lallemand; Chloe Zubieta; Soon Goo Lee; Yechun Wang; Samira Acajjaoui; Joanna Timmins; Sean McSweeney; Joseph M Jez; James G McCarthy; Andrew A McCarthy
Journal:  Plant Physiol       Date:  2012-07-20       Impact factor: 8.340

6.  Conformational folding and stability of the HET-C2 glycolipid transfer protein fold: does a molten globule-like state regulate activity?

Authors:  Roopa Kenoth; Ravi Kanth Kamlekar; Dhirendra K Simanshu; Yongguang Gao; Lucy Malinina; Franklyn G Prendergast; Julian G Molotkovsky; Dinshaw J Patel; Sergei Y Venyaminov; Rhoderick E Brown
Journal:  Biochemistry       Date:  2011-05-19       Impact factor: 3.162

7.  Effects of Histidine and Sucrose on the Biophysical Properties of a Monoclonal Antibody.

Authors:  Youngbin Baek; Nripen Singh; Abhiram Arunkumar; Andrew L Zydney
Journal:  Pharm Res       Date:  2016-12-29       Impact factor: 4.200

8.  Sequence-Defined Energetic Shifts Control the Disassembly Kinetics and Microstructure of Amelogenin Adsorbed onto Hydroxyapatite (100).

Authors:  Jinhui Tao; Garry W Buchko; Wendy J Shaw; James J De Yoreo; Barbara J Tarasevich
Journal:  Langmuir       Date:  2015-09-18       Impact factor: 3.882

9.  Histidine switch controlling pH-dependent protein folding and DNA binding in a transcription factor at the core of synthetic network devices.

Authors:  D K Deochand; I C Perera; R B Crochet; N C Gilbert; M E Newcomer; A Grove
Journal:  Mol Biosyst       Date:  2016-07-19

10.  Lactate modulates the intracellular pH sensitivity of human TREK1 channels.

Authors:  Swagata Ghatak; Sujit Kumar Sikdar
Journal:  Pflugers Arch       Date:  2016-02-03       Impact factor: 3.657
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.