| Literature DB >> 20537141 |
Hege K Vefring1, Line Wee, Astanand Jugessur, Håkon K Gjessing, Stein T Nilsen, Rolv T Lie.
Abstract
BACKGROUND: Preeclampsia is a debilitating disorder affecting approximately 3% of pregnant women in the Western world. Although inconclusive, current evidence suggests that the renin-angiotensin system may be involved in hypertension. Therefore, our objective was to determine whether the genes for placental renin (REN) and maternal angiotensinogen (AGT) interact to influence the risk of preeclampsia.Entities:
Mesh:
Substances:
Year: 2010 PMID: 20537141 PMCID: PMC2901215 DOI: 10.1186/1471-2350-11-90
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
PCR primers and SNP extension primers
| SNP | Primer sequence (5'- 3') | SNaPshot product size |
|---|---|---|
| rs5705 | REN-F: CAAGAGAATGCCCTCAATCC | |
| REN-R: CAAGCACTCACGTCCATGTAG | ||
| SNP-F: AGTGGAGCCAACCCATGAAGAGGCTGAC | 29 bp | |
| rs1464816 | REN-F: TCCTTGGTTGGAGTCTGGTC | |
| REN-R: GCTTTTCTTTTGCTGCTTGG | ||
| SNP-F: | 34 bp | |
| rs3795575 | REN-F: AAGAAGCCAAAGAGGGAAGG | |
| REN-R: GAAAGAGATGTCGGGGAGTG | ||
| SNP-F: | 40 bp | |
| rs943580 | AGT-F: CACAGAAAACAGCGGGAGAA | |
| AGT-R: GGCTTGGAAGTTGCTCGTAG | ||
| SNP-F: AGGAGTATAAAGTTGCCAAC | 21 bp | |
| rs2148582 | AGT-F: CTGCCGTTGTTCTGGGTACT | |
| AGT-R: CACAAGCCCTGCTATTCCTC | ||
| SNP-F: | 28 bp | |
| rs2478545 | AGT-F: ACCACGACAACCTCCTTGAG | |
| AGT-R: GACCCATTTCAGATGCCACT | ||
| SNP-F: | 34 bp |
Figure 1Example of a typical A. The SNaPshot result of a homozygous carrier of the most common REN haplotype, A-G-C (SNP order: rs5705, rs1464816 and rs3795575). B. The SNaPshot result of a patient carrying both the AGT haplotype C-T-A and haplotype t-c-g (SNP order: rs2148582, rs2478545 and rs943580). Lowercase denotes the minor allele at the locus and uppercase the major allele.
Relative risk estimates for REN (A) and AGT (B) haplotypes
| A: Relative risk estimates (95% CI; p-value) for maternal | |||
|---|---|---|---|
| 58.3 | 0.60 (0.24-1.51); 0.28 | ||
| C-c-g | 20.9 | 1.42 (0.65-3.12); 0.38 | 3.00 (0.93-9.93); 0.07 |
| 20.4 | 1.46 (0.66-3.20); 0.35 | ||
| 59.5 | 0.63 (0.27-1.46); 0.27 | ||
| A-t-C | 31.6 | 0.86 (0.37-1.95); 0.72 | 0.40 (0.12-1.39); 0.15 |
| c-G-t | 8.5 | 1.45 (0.66-3.19); 0.35 | Not estimable |
SNP order for AGT: rs218582 (C/t), rs2478545 (c/T) and rs943580 (A/g)
SNP order for REN: rs5705 (A/c), rs1464816 (G/t) and rs3795575 (C/t)
Relative risk estimates for REN and AGT interactions:
| A: Relative risk estimates (95% CI; p-value) for fetal | |||
|---|---|---|---|
| A-G-C | 61.3 | 0.62 (0.22-1.71); 0.36 | 0.33 (0.09-1.19); 0.09 |
| A-t-C | 29.4 | 1.03 (0.38-2.82); 0.96 | 0.62 (0.14-2.79); 0.54 |
| c-G-t | 8.9 | 1.29 (0.50-3.25); 0.59 | Not estimable |
| A-G-C | 55.2 | 1.53 (0.16-14.90); 0.71 | 1.0 (0.08-12.4); 0.99 |
| A-t-C | 38.0 | 2.40 (0.24-24.10); 0.46 | 0.89 (0.06-15.20); 0.93 |
| c-G-t | 5.8 | 0.60 (0.09-4.14); 0.60 | Not estimable |
SNP order for REN: rs5705 (A/c), rs1464816 (G/t) and rs3795575 (C/t)