Literature DB >> 20528769

Effect of 8-oxoguanine and abasic site DNA lesions on in vitro elongation by human DNA polymerase in the presence of replication protein A and proliferating-cell nuclear antigen.

Giada A Locatelli1, Helmut Pospiech, Nicolas Tanguy Le Gac, Barbara van Loon, Ulrich Hubscher, Sinikka Parkkinen, Juhani E Syväoja, Giuseppe Villani.   

Abstract

DNA pol (polymerase) is thought to be the leading strand replicase in eukaryotes. In the present paper, we show that human DNA pol can efficiently bypass an 8-oxo-G (7,8-dihydro-8-oxoguanine) lesion on the template strand by inserting either dCMP or dAMP opposite to it, but it cannot bypass an abasic site. During replication, DNA pols associate with accessory proteins that may alter their bypass ability. We investigated the role of the human DNA sliding clamp PCNA (proliferating-cell nuclear antigen) and of the human single-stranded DNA-binding protein RPA (replication protein A) in the modulation of the DNA synthesis and translesion capacity of DNA pol . RPA inhibited the elongation by human DNA pol on templates annealed to short primers. PCNA did not influence the elongation by DNA pol and had no effect on inhibition of elongation caused by RPA. RPA inhibition was considerably reduced when the length of the primers was increased. On templates bearing the 8-oxo-G lesion, this inhibitory effect was more pronounced on DNA replication beyond the lesion, suggesting that RPA may prevent extension by DNA pol after incorporation opposite an 8-oxo-G. Neither PCNA nor RPA had any effect on the inability of DNA pol to replicate past the AP site, independent of the primer length.

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Year:  2010        PMID: 20528769     DOI: 10.1042/BJ20100405

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  10 in total

1.  In vitro gap-directed translesion DNA synthesis of an abasic site involving human DNA polymerases epsilon, lambda, and beta.

Authors:  Giuseppe Villani; Ulrich Hubscher; Nadege Gironis; Sinikka Parkkinen; Helmut Pospiech; Igor Shevelev; Giulia di Cicco; Enni Markkanen; Juhani E Syväoja; Nicolas Tanguy Le Gac
Journal:  J Biol Chem       Date:  2011-07-13       Impact factor: 5.157

2.  APE1 incision activity at abasic sites in tandem repeat sequences.

Authors:  Mengxia Li; Jens Völker; Kenneth J Breslauer; David M Wilson
Journal:  J Mol Biol       Date:  2014-04-01       Impact factor: 5.469

3.  Gap-directed translesion DNA synthesis of an abasic site on circular DNA templates by a human replication complex.

Authors:  Giuseppe Villani; Igor Shevelev; Eleonora Orlando; Helmut Pospiech; Juhani E Syvaoja; Enni Markkanen; Ulrich Hubscher; Nicolas Tanguy Le Gac
Journal:  PLoS One       Date:  2014-04-07       Impact factor: 3.240

4.  The interplay at the replisome mitigates the impact of oxidative damage on the genetic integrity of hyperthermophilic Archaea.

Authors:  Tom Killelea; Adeline Palud; Farida Akcha; Mélanie Lemor; Stephane L'haridon; Anne Godfroy; Ghislaine Henneke
Journal:  Elife       Date:  2019-06-11       Impact factor: 8.140

5.  RPA2 winged-helix domain facilitates UNG-mediated removal of uracil from ssDNA; implications for repair of mutagenic uracil at the replication fork.

Authors:  Bodil Kavli; Tobias S Iveland; Edith Buchinger; Lars Hagen; Nina B Liabakk; Per A Aas; Tobias S Obermann; Finn L Aachmann; Geir Slupphaug
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

6.  Pol β associated complex and base excision repair factors in mouse fibroblasts.

Authors:  Rajendra Prasad; Jason G Williams; Esther W Hou; Samuel H Wilson
Journal:  Nucleic Acids Res       Date:  2012-10-05       Impact factor: 16.971

7.  Unique Hydrogen Bonding of Adenine with the Oxidatively Damaged Base 8-Oxoguanine Enables Specific Recognition and Repair by DNA Glycosylase MutY.

Authors:  Chandrima Majumdar; Paige L McKibbin; Allison E Krajewski; Amelia H Manlove; Jeehiun K Lee; Sheila S David
Journal:  J Am Chem Soc       Date:  2020-11-17       Impact factor: 16.383

8.  Non-bulky Lesions in Human DNA: the Ways of Formation, Repair, and Replication.

Authors:  A V Ignatov; K A Bondarenko; A V Makarova
Journal:  Acta Naturae       Date:  2017 Jul-Sep       Impact factor: 1.845

9.  Analysis of large deletion mutations induced by abasic site analog in human cells.

Authors:  Tetsuya Suzuki; Yuri Katayama; Yasuo Komatsu; Hiroyuki Kamiya
Journal:  Genes Environ       Date:  2018-10-24

10.  Reactions of 3',5'-di-O-acetyl-2'-deoxyguansoine and 3',5'-di-O-acetyl-2'-deoxyadenosine to UV light in the presence of uric acid.

Authors:  Toshinori Suzuki; Miyu Takeuchi; Atsuko Ozawa-Tamura
Journal:  Genes Environ       Date:  2022-01-21
  10 in total

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