Literature DB >> 20526700

Sequence specific 1H, 13C and 15N backbone resonance assignments of UVI31+ from Chlamydomonas reinhardtii.

Ashok K Rout1, R Minda, D Peri, V Ramakrishnan, S K Bhattacharjee, B J Rao, K V R Chary.   

Abstract

The cDNA of UVI31+ was cloned from C. reinhardtii and expressed in E. coli from where the protein was purified to homogeneity. The purified protein exhibited beta-lactamase activity (Manuscript in preparation). However, UVI31+ has no homology with the known β-lactamases. In order to understand the structural basis of the ability of UVI31+ to hydrolyze β-lactam antibiotics, we in parallel, set out to structurally characterize it by NMR. Its β-lactamase activity in relation to the solution structure by NMR is likely to provoke deeper understanding of its mechanism and facilitate the rationalization of other functions of the protein, if any. In this endeavor, we report almost complete sequence-specific backbone (1)H, (13)C and (15)N NMR assignments of UVI31+.

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Year:  2010        PMID: 20526700     DOI: 10.1007/s12104-010-9239-4

Source DB:  PubMed          Journal:  Biomol NMR Assign        ISSN: 1874-270X            Impact factor:   0.746


  4 in total

1.  Active site detection by spatial conformity and electrostatic analysis--unravelling a proteolytic function in shrimp alkaline phosphatase.

Authors:  Sandeep Chakraborty; Renu Minda; Lipika Salaye; Swapan K Bhattacharjee; Basuthkar J Rao
Journal:  PLoS One       Date:  2011-12-08       Impact factor: 3.240

2.  Structural characterization of a novel KH-domain containing plant chloroplast endonuclease.

Authors:  Ashok K Rout; Himanshu Singh; Sunita Patel; Vandana Raghvan; Saurabh Gautam; R Minda; Basuthkar J Rao; Kandala V R Chary
Journal:  Sci Rep       Date:  2018-09-13       Impact factor: 4.379

3.  UVI31+ is a DNA endonuclease that dynamically localizes to chloroplast pyrenoids in C. reinhardtii.

Authors:  Manish Shukla; Renu Minda; Himanshu Singh; Srikanth Tirumani; Kandala V R Chary; Basuthkar J Rao
Journal:  PLoS One       Date:  2012-12-17       Impact factor: 3.240

4.  A computational module assembled from different protease family motifs identifies PI PLC from Bacillus cereus as a putative prolyl peptidase with a serine protease scaffold.

Authors:  Adela Rendón-Ramírez; Manish Shukla; Masataka Oda; Sandeep Chakraborty; Renu Minda; Abhaya M Dandekar; Bjarni Ásgeirsson; Félix M Goñi; Basuthkar J Rao
Journal:  PLoS One       Date:  2013-08-05       Impact factor: 3.240

  4 in total

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