Literature DB >> 20525598

Barcoding bamboozled by bacteria: convergence to metazoan mitochondrial primer targets by marine microbes.

Mark E Siddall1, Frank M Fontanella, Sara C Watson, Sebastian Kvist, Christer Erséus.   

Abstract

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Year:  2009        PMID： 20525598     DOI： 10.1093/sysbio/syp033

Source DB:  PubMed          Journal:  Syst Biol        ISSN： 1063-5157            Impact factor:   15.683


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  13 in total

1.  The effect of geographical scale of sampling on DNA barcoding.

Authors:  Johannes Bergsten; David T Bilton; Tomochika Fujisawa; Miranda Elliott; Michael T Monaghan; Michael Balke; Lars Hendrich; Joja Geijer; Jan Herrmann; Garth N Foster; Ignacio Ribera; Anders N Nilsson; Timothy G Barraclough; Alfried P Vogler
Journal:  Syst Biol       Date:  2012-03-07       Impact factor: 15.683

2.  Barcoding sponges: an overview based on comprehensive sampling.

Authors:  Sergio Vargas; Astrid Schuster; Katharina Sacher; Gabrielle Büttner; Simone Schätzle; Benjamin Läuchli; Kathryn Hall; John N A Hooper; Dirk Erpenbeck; Gert Wörheide
Journal:  PLoS One       Date:  2012-07-03       Impact factor: 3.240

3.  Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans.

Authors:  Jorge Lobo; Pedro M Costa; Marcos A L Teixeira; Maria S G Ferreira; Maria H Costa; Filipe O Costa
Journal:  BMC Ecol       Date:  2013-09-10       Impact factor: 2.964

4.  Challenges to a molecular approach to prey identification in the Burmese python, Python molurus bivittatus.

Authors:  Bryan G Falk; Robert N Reed
Journal:  PeerJ       Date:  2015-11-24       Impact factor: 2.984

5.  DNA barcoding Brooklyn (New York): A first assessment of biodiversity in Marine Park by citizen scientists.

Authors:  Christine Marizzi; Antonia Florio; Melissa Lee; Mohammed Khalfan; Cornel Ghiban; Bruce Nash; Jenna Dorey; Sean McKenzie; Christine Mazza; Fabiana Cellini; Carlo Baria; Ron Bepat; Lena Cosentino; Alexander Dvorak; Amina Gacevic; Cristina Guzman-Moumtzis; Francesca Heller; Nicholas Alexander Holt; Jeffrey Horenstein; Vincent Joralemon; Manveer Kaur; Tanveer Kaur; Armani Khan; Jessica Kuppan; Scott Laverty; Camila Lock; Marianne Pena; Ilona Petrychyn; Indu Puthenkalam; Daval Ram; Arlene Ramos; Noelle Scoca; Rachel Sin; Izabel Gonzalez; Akansha Thakur; Husan Usmanov; Karen Han; Andy Wu; Tiger Zhu; David Andrew Micklos
Journal:  PLoS One       Date:  2018-07-18       Impact factor: 3.240

6.  GenBank is a reliable resource for 21st century biodiversity research.

Authors:  Matthieu Leray; Nancy Knowlton; Shian-Lei Ho; Bryan N Nguyen; Ryuji J Machida
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-21       Impact factor: 11.205

7.  BOLD and GenBank revisited - Do identification errors arise in the lab or in the sequence libraries?

Authors:  Mikko Pentinsaari; Sujeevan Ratnasingham; Scott E Miller; Paul D N Hebert
Journal:  PLoS One       Date:  2020-04-16       Impact factor: 3.240

8.  A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents.

Authors:  Matthieu Leray; Joy Y Yang; Christopher P Meyer; Suzanne C Mills; Natalia Agudelo; Vincent Ranwez; Joel T Boehm; Ryuji J Machida
Journal:  Front Zool       Date:  2013-06-14       Impact factor: 3.172

9.  DNA barcoding identifies a cosmopolitan diet in the ocean sunfish.

Authors:  Lara L Sousa; Raquel Xavier; Vânia Costa; Nicolas E Humphries; Clive Trueman; Rui Rosa; David W Sims; Nuno Queiroz
Journal:  Sci Rep       Date:  2016-07-04       Impact factor: 4.379

10.  Instances of erroneous DNA barcoding of metazoan invertebrates: Are universal cox1 gene primers too "universal"?

Authors:  Monika Mioduchowska; Michał Jan Czyż; Bartłomiej Gołdyn; Jarosław Kur; Jerzy Sell
Journal:  PLoS One       Date:  2018-06-22       Impact factor: 3.240
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