Literature DB >> 20523132

Quantification of nonselective bulk autophagy in S. cerevisiae using Pgk1-GFP.

Evelyn Welter1, Michael Thumm, Roswitha Krick.   

Abstract

Rapid estimation of the macroautophagi crate has become of great importance over the past few years. A variety of methods to follow autophagy were established both in S. cerevisiae and the mammalian system. In yeast,measuring the breakdown of GFP-Atg8,and in mammalian cells counting the increase of LC3 puncta, have become the most commonly used assays to quantify autophagy. Here, we provide degradation of Pgk1-GFP followed in immunoblots as a new convenient tool to quantify nonselective bulk autophagy in yeast.

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Year:  2010        PMID: 20523132     DOI: 10.4161/auto.6.6.12348

Source DB:  PubMed          Journal:  Autophagy        ISSN: 1554-8627            Impact factor:   16.016


  38 in total

1.  GFP-Atg8 protease protection as a tool to monitor autophagosome biogenesis.

Authors:  Usha Nair; Michael Thumm; Daniel J Klionsky; Roswitha Krick
Journal:  Autophagy       Date:  2011-12       Impact factor: 16.016

2.  Gyp1 has a dual function as Ypt1 GAP and interaction partner of Atg8 in selective autophagy.

Authors:  Anne Lisa Mitter; Petra Schlotterhose; Roswitha Krick
Journal:  Autophagy       Date:  2019-01-27       Impact factor: 16.016

3.  Recovery from rapamycin: drug-insensitive activity of yeast target of rapamycin complex 1 (TORC1) supports residual proliferation that dilutes rapamycin among progeny cells.

Authors:  Stephanie K Evans; Karl E V Burgess; Joseph V Gray
Journal:  J Biol Chem       Date:  2014-08-07       Impact factor: 5.157

4.  Distinct temporal requirements for autophagy and the proteasome in yeast meiosis.

Authors:  Fu-ping Wen; Yue-shuai Guo; Yang Hu; Wei-xiao Liu; Qian Wang; Yuan-ting Wang; Hai-Yan Yu; Chao-ming Tang; Jun Yang; Tao Zhou; Zhi-ping Xie; Jia-hao Sha; Xuejiang Guo; Wei Li
Journal:  Autophagy       Date:  2016       Impact factor: 16.016

5.  Autophagy induction under carbon starvation conditions is negatively regulated by carbon catabolite repression.

Authors:  Atsuhiro Adachi; Michiko Koizumi; Yoshinori Ohsumi
Journal:  J Biol Chem       Date:  2017-10-17       Impact factor: 5.157

Review 6.  The yeast Saccharomyces cerevisiae: an overview of methods to study autophagy progression.

Authors:  Elizabeth Delorme-Axford; Rodrigo Soares Guimaraes; Fulvio Reggiori; Daniel J Klionsky
Journal:  Methods       Date:  2014-12-16       Impact factor: 3.608

7.  Structural and functional characterization of the two phosphoinositide binding sites of PROPPINs, a β-propeller protein family.

Authors:  Roswitha Krick; Ricarda A Busse; Andreea Scacioc; Milena Stephan; Andreas Janshoff; Michael Thumm; Karin Kühnel
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-02       Impact factor: 11.205

8.  The Atg2-Atg18 complex tethers pre-autophagosomal membranes to the endoplasmic reticulum for autophagosome formation.

Authors:  Tetsuya Kotani; Hiromi Kirisako; Michiko Koizumi; Yoshinori Ohsumi; Hitoshi Nakatogawa
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-25       Impact factor: 11.205

9.  Describing autophagy via analysis of individual organelles by capillary electrophoresis with laser induced fluorescence detection.

Authors:  Chad P Satori; Edgar A Arriaga
Journal:  Anal Chem       Date:  2013-11-14       Impact factor: 6.986

10.  Autophagic clearance of proteasomes in yeast requires the conserved sorting nexin Snx4.

Authors:  Antonia A Nemec; Lauren A Howell; Anna K Peterson; Matthew A Murray; Robert J Tomko
Journal:  J Biol Chem       Date:  2017-11-06       Impact factor: 5.157

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