Literature DB >> 20522624

Molecular characterization of Mycobacterium intracellulare-related strains based on the sequence analysis of hsp65, internal transcribed spacer and 16S rRNA genes.

Joo-Hee Park1,2, Tae-Sun Shim3, Seung-Ae Lee1,2, Hyungki Lee1,2, In-Kyung Lee1,2, Kijeong Kim4, Yoon-Hoh Kook1,2, Bum-Joon Kim1,2.   

Abstract

We investigated the molecular epidemiological features of 94 Mycobacterium intracellulare-related strains, isolated from Korean patients, using sequence analysis targeting 3 independent chronometer molecules, hsp65, the internal transcribed spacer 1 region and the 16S rRNA gene. By collective consideration of these three gene-based approaches, the 94 strains were divided into 5 groups (INT1, INT2, INT3, INT4 and INT5). The frequencies of genotype INT1, 2, 3, 4 and 5 in the 94 isolates were 57.4 % (54), 27.7 % (26), 6.4 % (6), 5.3 % (5) and 3.2 % (3), respectively. When correlations between genotypes and clinical parameters (age, sex, radiological type and the presence of a cavity) were analysed in 78 patients with non-tuberculous mycobacteria pulmonary diseases, no relationships were observed with respect to age, sex and radiological type, but genotype and the presence of a cavity tended to be related (P=0.051).

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Year:  2010        PMID: 20522624     DOI: 10.1099/jmm.0.020727-0

Source DB:  PubMed          Journal:  J Med Microbiol        ISSN: 0022-2615            Impact factor:   2.472


  11 in total

1.  Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-02.

Authors:  Byoung-Jun Kim; Beom-Soon Choi; Jong-Sung Lim; Ik-Young Choi; Je-Hee Lee; Jongsik Chun; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

2.  Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-36Y, belonging to the INT5 genotype.

Authors:  Byoung-Jun Kim; Beom-Soon Choi; Ik-Young Choi; Je-Hee Lee; Jongsik Chun; Seok-Hyun Hong; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

3.  Complete genome sequence of Mycobacterium intracellulare clinical strain MOTT-64, belonging to the INT1 genotype.

Authors:  Byoung-Jun Kim; Beom-Soon Choi; Jong-Sung Lim; Ik-Young Choi; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  J Bacteriol       Date:  2012-06       Impact factor: 3.490

Review 4.  Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria.

Authors:  Tomasz Jagielski; Alina Minias; Jakko van Ingen; Nalin Rastogi; Anna Brzostek; Anna Żaczek; Jarosław Dziadek
Journal:  Clin Microbiol Rev       Date:  2016-04       Impact factor: 26.132

5.  Synovitis of the wrist caused by Mycobacterium florentinum.

Authors:  Y Nukui; H Nakamura; H Ishioka; H Miyamoto; A Okamoto; Y Kazumi; H Yotsuyanagi; K Moriya; S Hatakeyama
Journal:  Infection       Date:  2013-11-22       Impact factor: 3.553

6.  Molecular Typing of Mycobacterium intracellulare Using Pulsed-Field Gel Electrophoresis, Variable-Number Tandem-Repeat Analysis, Mycobacteria Interspersed Repetitive-Unit-Variable-Number Tandem Repeat Typing, and Multilocus Sequence Typing: Molecular Characterization and Comparison of Each Typing Methods.

Authors:  Semi Jeon; Nara Lim; Seungjik Kwon; Taesun Shim; Misun Park; Bum-Joon Kim; Seonghan Kim
Journal:  Osong Public Health Res Perspect       Date:  2014-05-09

7.  Whole-Genome Sequence of Mycobacterium intracellulare Clinical Strain MOTT-H4Y, Belonging to INT5 Genotype.

Authors:  Hyungki Lee; Byoung-Jun Kim; Kijeong Kim; Seok-Hyun Hong; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  Genome Announc       Date:  2013-02-28

8.  Molecular evidence of lateral gene transfer in rpoB gene of Mycobacterium yongonense strains via multilocus sequence analysis.

Authors:  Byoung-Jun Kim; Seok-Hyun Hong; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  PLoS One       Date:  2013-01-31       Impact factor: 3.240

9.  Whole-Genome Sequence of a Novel Species, Mycobacterium yongonense DSM 45126T.

Authors:  Byoung-Jun Kim; Bo-Ram Kim; So-Young Lee; Seung-Hyeok Seok; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  Genome Announc       Date:  2013-08-08

10.  Molecular Taxonomic Evidence for Two Distinct Genotypes of Mycobacterium yongonense via Genome-Based Phylogenetic Analysis.

Authors:  Byoung-Jun Kim; Bo-Ram Kim; So-Young Lee; Ga-Na Kim; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  PLoS One       Date:  2016-03-31       Impact factor: 3.240

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