Literature DB >> 20521244

Using the ensembl genome server to browse genomic sequence data.

Xosé M Fernández-Suárez1, Michael K Schuster.   

Abstract

The Ensembl project provides a comprehensive source of automatic annotation of the human genome sequence, as well as other species of biomedical interest, with confirmed gene predictions that have been integrated with external data sources. This unit describes how to use the Ensembl genome browser (http://www.ensembl.org/), the public interface of the project. It describes how to find a gene or protein of interest, how to get additional information and external links, and how to use the comparative genomic data. Curr. Protoc. Bioinform. 30:1.15.1-1.15.48. (c) 2010 by John Wiley & Sons, Inc.

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Year:  2010        PMID: 20521244     DOI: 10.1002/0471250953.bi0115s30

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  6 in total

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3.  Gene expression profiling of peripheral blood mononuclear cells in the setting of peripheral arterial disease.

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Journal:  J Clin Bioinforma       Date:  2012-03-12

4.  SNPversity: a web-based tool for visualizing diversity.

Authors:  David A Schott; Abhinav G Vinnakota; John L Portwood; Carson M Andorf; Taner Z Sen
Journal:  Database (Oxford)       Date:  2018-01-01       Impact factor: 3.451

5.  The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases.

Authors:  Sandra Orchard; Mais Ammari; Bruno Aranda; Lionel Breuza; Leonardo Briganti; Fiona Broackes-Carter; Nancy H Campbell; Gayatri Chavali; Carol Chen; Noemi del-Toro; Margaret Duesbury; Marine Dumousseau; Eugenia Galeota; Ursula Hinz; Marta Iannuccelli; Sruthi Jagannathan; Rafael Jimenez; Jyoti Khadake; Astrid Lagreid; Luana Licata; Ruth C Lovering; Birgit Meldal; Anna N Melidoni; Mila Milagros; Daniele Peluso; Livia Perfetto; Pablo Porras; Arathi Raghunath; Sylvie Ricard-Blum; Bernd Roechert; Andre Stutz; Michael Tognolli; Kim van Roey; Gianni Cesareni; Henning Hermjakob
Journal:  Nucleic Acids Res       Date:  2013-11-13       Impact factor: 16.971

6.  Assessment of databases to determine the validity of β- and γ-carbonic anhydrase sequences from vertebrates.

Authors:  Reza Zolfaghari Emameh; Marianne Kuuslahti; Hassan Nosrati; Hannes Lohi; Seppo Parkkila
Journal:  BMC Genomics       Date:  2020-05-11       Impact factor: 3.969

  6 in total

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