Literature DB >> 20520587

Genome-wide association study identifies genes that may contribute to risk for developing heroin addiction.

David A Nielsen1, Fei Ji, Vadim Yuferov, Ann Ho, Chunsheng He, Jurg Ott, Mary Jeanne Kreek.   

Abstract

OBJECTIVES: We have used genome-wide association studies to identify variants that are associated with vulnerability to develop heroin addiction.
METHODS: DNA from 325 methadone stabilized, former severe heroin addicts and 250 control individuals were pooled by ethnicity (Caucasian and African-American) and analyzed using the Affymetrix GeneChip Mapping 100 K Set. Genome-wide association tests were conducted.
RESULTS: The strongest association with vulnerability to develop heroin addiction, with experiment-wise significance (P=0.035), was found in Caucasians with the variant rs10494334, a variant in an unannotated region of the genome (1q23.3). In African Americans, the variant most significantly associated with the heroin addiction vulnerability was rs950302, found in the cytosolic dual specificity phosphatase 27 gene DUSP27 (point-wise P=0.0079). Furthermore, analysis of the top 500 variants with the most significant associations (point-wise P< or =0.0036) in Caucasians showed that three of these variants are clustered in the regulating synaptic membrane exocytosis protein 2 gene RIMS2. Of the top 500 variants in African-Americans (point-wise P< or =0.0238), three variants are in the cardiomyopathy associated 3 gene CMYA3.
CONCLUSION: This study identifies new genes and variants that may increase an individual's vulnerability to develop heroin addiction.

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Year:  2010        PMID: 20520587      PMCID: PMC3832188          DOI: 10.1097/YPG.0b013e32833a2106

Source DB:  PubMed          Journal:  Psychiatr Genet        ISSN: 0955-8829            Impact factor:   2.458


  42 in total

1.  Genomewide linkage scan for opioid dependence and related traits.

Authors:  Joel Gelernter; Carolien Panhuysen; Marsha Wilcox; Victor Hesselbrock; Bruce Rounsaville; James Poling; Roger Weiss; Susan Sonne; Hongyu Zhao; Lindsay Farrer; Henry R Kranzler
Journal:  Am J Hum Genet       Date:  2006-03-16       Impact factor: 11.025

2.  Genome-wide linkage analysis of heroin dependence in Han Chinese: results from wave one of a multi-stage study.

Authors:  Stephen J Glatt; Jessica A Su; Shao C Zhu; Ruimin Zhang; Bo Zhang; Jixiang Li; Xiaobo Yuan; Jianhua Li; Michael J Lyons; Stephen V Faraone; Ming T Tsuang
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2006-09-05       Impact factor: 3.568

3.  Addiction molecular genetics: 639,401 SNP whole genome association identifies many "cell adhesion" genes.

Authors:  Qing-Rong Liu; Tomas Drgon; Catherine Johnson; Donna Walther; Judith Hess; George R Uhl
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2006-12-05       Impact factor: 3.568

4.  Identification and characterization of DUSP27, a novel dual-specific protein phosphatase.

Authors:  Ilan Friedberg; Konstantina Nika; Lutz Tautz; Kan Saito; Fabio Cerignoli; Iddo Friedberg; Adam Godzik; Tomas Mustelin
Journal:  FEBS Lett       Date:  2007-04-30       Impact factor: 4.124

5.  Pooled association genome scanning for alcohol dependence using 104,268 SNPs: validation and use to identify alcoholism vulnerability loci in unrelated individuals from the collaborative study on the genetics of alcoholism.

Authors:  Catherine Johnson; Tomas Drgon; Qing-Rong Liu; Donna Walther; Howard Edenberg; John Rice; Tatiana Foroud; George R Uhl
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2006-12-05       Impact factor: 3.568

6.  Genomewide suggestive linkage of opioid dependence to chromosome 14q.

Authors:  Herbert M Lachman; Cathy S J Fann; Michael Bartzis; Oleg V Evgrafov; Richard N Rosenthal; Edward V Nunes; Christian Miner; Maria Santana; Jebediah Gaffney; Amy Riddick; Chia-Lin Hsu; James A Knowles
Journal:  Hum Mol Genet       Date:  2007-04-04       Impact factor: 6.150

7.  Genome-wide association for methamphetamine dependence: convergent results from 2 samples.

Authors:  George R Uhl; Tomas Drgon; Qing-Rong Liu; Catherine Johnson; Donna Walther; Tokutaro Komiyama; Mutsuo Harano; Yoshimoto Sekine; Toshiya Inada; Norio Ozaki; Masaomi Iyo; Nakao Iwata; Mitsuhiko Yamada; Ichiro Sora; Chih-Ken Chen; Hsing-Cheng Liu; Hiroshi Ujike; Shih-Ku Lin
Journal:  Arch Gen Psychiatry       Date:  2008-03

8.  TPH2 and TPH1: association of variants and interactions with heroin addiction.

Authors:  David A Nielsen; Sandra Barral; Dmitri Proudnikov; Scott Kellogg; Ann Ho; Jurg Ott; Mary Jeanne Kreek
Journal:  Behav Genet       Date:  2008-01-08       Impact factor: 2.805

9.  Molecular genetics of nicotine dependence and abstinence: whole genome association using 520,000 SNPs.

Authors:  George R Uhl; Qing-Rong Liu; Tomas Drgon; Catherine Johnson; Donna Walther; Jed E Rose
Journal:  BMC Genet       Date:  2007-04-03       Impact factor: 2.797

10.  Pooled DNA genotyping on Affymetrix SNP genotyping arrays.

Authors:  George Kirov; Ivan Nikolov; Lyudmila Georgieva; Valentina Moskvina; Michael J Owen; Michael C O'Donovan
Journal:  BMC Genomics       Date:  2006-02-15       Impact factor: 3.969

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  32 in total

Review 1.  Introduction to deep sequencing and its application to drug addiction research with a focus on rare variants.

Authors:  Shaolin Wang; Zhongli Yang; Jennie Z Ma; Thomas J Payne; Ming D Li
Journal:  Mol Neurobiol       Date:  2013-08-30       Impact factor: 5.590

Review 2.  Extreme marginalization: addiction and other mental health disorders, stigma, and imprisonment.

Authors:  Mary Jeanne Kreek
Journal:  Ann N Y Acad Sci       Date:  2011-08       Impact factor: 5.691

3.  Structure of human dual-specificity phosphatase 27 at 2.38 Å resolution.

Authors:  George T Lountos; Joseph E Tropea; David S Waugh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-04-16

4.  KAT2B polymorphism identified for drug abuse in African Americans with regulatory links to drug abuse pathways in human prefrontal cortex.

Authors:  Eric O Johnson; Dana B Hancock; Joshua L Levy; Nathan C Gaddis; Grier P Page; Cristie Glasheen; Nancy L Saccone; Laura J Bierut; Alex H Kral
Journal:  Addict Biol       Date:  2015-07-23       Impact factor: 4.280

5.  Genome-Wide Association Study of Behavioral Disinhibition in a Selected Adolescent Sample.

Authors:  Jaime Derringer; Robin P Corley; Brett C Haberstick; Susan E Young; Brittany A Demmitt; Daniel P Howrigan; Robert M Kirkpatrick; William G Iacono; Matt McGue; Matthew C Keller; Sandra Brown; Susan Tapert; Christian J Hopfer; Michael C Stallings; Thomas J Crowley; Soo Hyun Rhee; Ken Krauter; John K Hewitt; Matthew B McQueen
Journal:  Behav Genet       Date:  2015-01-31       Impact factor: 2.805

Review 6.  A Review of Genome-Wide Association Studies of Stimulant and Opioid Use Disorders.

Authors:  Kevin P Jensen
Journal:  Mol Neuropsychiatry       Date:  2016-04-13

7.  Cis-Expression Quantitative Trait Loci Mapping Reveals Replicable Associations with Heroin Addiction in OPRM1.

Authors:  Dana B Hancock; Joshua L Levy; Nathan C Gaddis; Cristie Glasheen; Nancy L Saccone; Grier P Page; Gary K Hulse; Dieter Wildenauer; Erin A Kelty; Sibylle G Schwab; Louisa Degenhardt; Nicholas G Martin; Grant W Montgomery; John Attia; Elizabeth G Holliday; Mark McEvoy; Rodney J Scott; Laura J Bierut; Elliot C Nelson; Alex H Kral; Eric O Johnson
Journal:  Biol Psychiatry       Date:  2015-01-29       Impact factor: 13.382

Review 8.  The genetics of substance dependence.

Authors:  Jen-Chyong Wang; Manav Kapoor; Alison M Goate
Journal:  Annu Rev Genomics Hum Genet       Date:  2012-06-11       Impact factor: 8.929

9.  An intronic variant in OPRD1 predicts treatment outcome for opioid dependence in African-Americans.

Authors:  Richard C Crist; Toni-Kim Clarke; Alfonso Ang; Lisa M Ambrose-Lanci; Falk W Lohoff; Andrew J Saxon; Walter Ling; Maureen P Hillhouse; R Douglas Bruce; George Woody; Wade H Berrettini
Journal:  Neuropsychopharmacology       Date:  2013-04-23       Impact factor: 7.853

10.  DISC1 as a Possible Genetic Contribution to Opioid Dependence in a Polish Sample.

Authors:  Sylwia Fudalej; Andrzej Jakubczyk; Maciej Kopera; Jerzy Piwonski; Wojciech Bielecki; Wojciech Drygas; Krystyna Wasilewska; Mark Ilgen; Amy Bohnert; Kristen Barry; Rafał Płoski; Frederic C Blow; Marcin Wojnar
Journal:  J Stud Alcohol Drugs       Date:  2016-03       Impact factor: 2.582

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