Literature DB >> 20519963

Cell death goes LIVE: technological advances in real-time tracking of cell death.

Joanna Skommer1, Zbigniew Darzynkiewicz, Donald Wlodkowic.   

Abstract

Cell population can be viewed as a quantum system, which like Schrödinger's cat exists as a combination of survival- and death-allowing states. Tracking and understanding cell-to-cell variability in processes of high spatio-temporal complexity such as cell death is at the core of current systems biology approaches. As probabilistic modeling tools attempt to impute information inaccessible by current experimental approaches, advances in technologies for single-cell imaging and omics (proteomics, genomics, metabolomics) should go hand in hand with the computational efforts. Over the last few years we have made exciting technological advances that allow studies of cell death dynamically in real-time and with the unprecedented accuracy. These approaches are based on innovative fluorescent assays and recombinant proteins, bioelectrical properties of cells, and more recently also on state-of-the-art optical spectroscopy. Here, we review current status of the most innovative analytical technologies for dynamic tracking of cell death, and address the interdisciplinary promises and future challenges of these methods.

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Year:  2010        PMID: 20519963      PMCID: PMC3037440          DOI: 10.4161/cc.9.12.11911

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  104 in total

1.  A label-free photonic crystal biosensor imaging method for detection of cancer cell cytotoxicity and proliferation.

Authors:  Leo L Chan; Saujanya L Gosangari; Kenneth L Watkin; Brian T Cunningham
Journal:  Apoptosis       Date:  2007-06       Impact factor: 4.677

2.  Single nanoparticle photothermal tracking (SNaPT) of 5-nm gold beads in live cells.

Authors:  David Lasne; Gerhard A Blab; Stéphane Berciaud; Martin Heine; Laurent Groc; Daniel Choquet; Laurent Cognet; Brahim Lounis
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

3.  An Annexin V-based biosensor for quantitatively detecting early apoptotic cells.

Authors:  Chunyi Tong; Baoxiang Shi; Xiaojuan Xiao; Hongdong Liao; Yuanqing Zheng; Guoli Shen; Dongying Tang; Xuanming Liu
Journal:  Biosens Bioelectron       Date:  2008-08-05       Impact factor: 10.618

Review 4.  Atomic force microscopy of biological membranes.

Authors:  Patrick L T M Frederix; Patrick D Bosshart; Andreas Engel
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

5.  Systems analysis of effector caspase activation and its control by X-linked inhibitor of apoptosis protein.

Authors:  Markus Rehm; Heinrich J Huber; Heiko Dussmann; Jochen H M Prehn
Journal:  EMBO J       Date:  2006-08-24       Impact factor: 11.598

6.  Quantum dots based probes conjugated to annexin V for photostable apoptosis detection and imaging.

Authors:  Séverine Le Gac; Istvan Vermes; Albert van den Berg
Journal:  Nano Lett       Date:  2006-09       Impact factor: 11.189

7.  Generation of a fluorescently labeled endogenous protein library in living human cells.

Authors:  Alex Sigal; Tamar Danon; Ariel Cohen; Ron Milo; Naama Geva-Zatorsky; Gila Lustig; Yuvalal Liron; Uri Alon; Natalie Perzov
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 8.  Mechanics, malignancy, and metastasis: the force journey of a tumor cell.

Authors:  Sanjay Kumar; Valerie M Weaver
Journal:  Cancer Metastasis Rev       Date:  2009-06       Impact factor: 9.264

9.  Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability.

Authors:  Stefan Legewie; Nils Blüthgen; Hanspeter Herzel
Journal:  PLoS Comput Biol       Date:  2006-07-28       Impact factor: 4.475

10.  Practical and reliable FRET/FLIM pair of fluorescent proteins.

Authors:  Dmitry Shcherbo; Ekaterina A Souslova; Joachim Goedhart; Tatyana V Chepurnykh; Anna Gaintzeva; Irina I Shemiakina; Theodorus W J Gadella; Sergey Lukyanov; Dmitriy M Chudakov
Journal:  BMC Biotechnol       Date:  2009-03-25       Impact factor: 2.563

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  10 in total

1.  Cytometry of the cell cycle: In search for perfect methodology for DNA content analysis in tissue specimens.

Authors:  Zbigniew Darzynkiewicz
Journal:  Cell Cycle       Date:  2010-09-01       Impact factor: 4.534

2.  Real-time cell viability assays using a new anthracycline derivative DRAQ7®.

Authors:  Jin Akagi; Magdalena Kordon; Hong Zhao; Anna Matuszek; Jurek Dobrucki; Rachel Errington; Paul J Smith; Kazuo Takeda; Zbigniew Darzynkiewicz; Donald Wlodkowic
Journal:  Cytometry A       Date:  2012-11-16       Impact factor: 4.355

3.  Rise of the micromachines: microfluidics and the future of cytometry.

Authors:  Donald Wlodkowic; Zbigniew Darzynkiewicz
Journal:  Methods Cell Biol       Date:  2011       Impact factor: 1.441

4.  Multivariate analysis of apoptotic markers versus cell cycle phase in living human cancer cells by microfluidic cytometry.

Authors:  Jin Akagi; Joanna Skommer; Anna Matuszek; Kazuo Takeda; Yuu Fujimura; Khashayar Khoshmanesh; Kourosh Kalantar-Zadeh; Arnan Mitchell; Rachel Errington; Paul J Smith; Zbigniew Darzynkiewicz; Donald Wlodkowic
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-09

5.  Kinetic viability assays using DRAQ7 probe.

Authors:  Donald Wlodkowic; Jin Akagi; Jurek Dobrucki; Rachel Errington; Paul J Smith; Kazuo Takeda; Zbigniew Darzynkiewicz
Journal:  Curr Protoc Cytom       Date:  2013-07

6.  New biomarkers probing depth of cell senescence assessed by laser scanning cytometry.

Authors:  Hong Zhao; H Dorota Halicka; Frank Traganos; Ellen Jorgensen; Zbigniew Darzynkiewicz
Journal:  Cytometry A       Date:  2010-11       Impact factor: 4.355

Review 7.  Cytometry of apoptosis. Historical perspective and new advances.

Authors:  D Wlodkowic; J Skommer; Z Darzynkiewicz
Journal:  Exp Oncol       Date:  2012-10

Review 8.  DNA damage signaling assessed in individual cells in relation to the cell cycle phase and induction of apoptosis.

Authors:  Zbigniew Darzynkiewicz; Hong Zhao; H Dorota Halicka; Paulina Rybak; Jurek Dobrucki; Donald Wlodkowic
Journal:  Crit Rev Clin Lab Sci       Date:  2012-11-09       Impact factor: 6.250

9.  A multivariate, quantitative assay that disentangles key kinetic parameters of primary human T cell function in vitro.

Authors:  Grace L Huang; Daniel P Nampe; Jason Yi; Grant B Gabrelow; Kathleen R Negri; Alexander Kamb; Han Xu
Journal:  PLoS One       Date:  2020-11-09       Impact factor: 3.240

10.  Retinitis pigmentosa: rapid neurodegeneration is governed by slow cell death mechanisms.

Authors:  A Sahaboglu; O Paquet-Durand; J Dietter; K Dengler; S Bernhard-Kurz; P Ar Ekström; B Hitzmann; M Ueffing; F Paquet-Durand
Journal:  Cell Death Dis       Date:  2013-02-07       Impact factor: 8.469

  10 in total

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