Literature DB >> 20513925

The ovuscule.

Philippe Thévenaz1, Ricard Delgado-Gonzalo, Michael Unser.   

Abstract

We propose an active contour (a.k.a. snake) that takes the shape of an ellipse. Its evolution is driven by surface terms made of two contributions: the integral of the data over an inner ellipse, counterbalanced by the integral of the data over an outer elliptical shell. We iteratively adapt the active contour to maximize the contrast between the two domains, which results in a snake that seeks elliptical bright blobs. We provide analytic expressions for the gradient of the snake with respect to its defining parameters, which allows for the use of efficient optimizers. An important contribution here is the parameterization of the ellipse which we define in such a way that all parameters have equal importance; this creates a favorable landscape for the proceedings of the optimizer. We validate our construct with synthetic data and illustrate its use on real data as well.

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Year:  2011        PMID: 20513925     DOI: 10.1109/TPAMI.2010.112

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  9 in total

1.  Mechanical state, material properties and continuous description of an epithelial tissue.

Authors:  Isabelle Bonnet; Philippe Marcq; Floris Bosveld; Luc Fetler; Yohanns Bellaïche; François Graner
Journal:  J R Soc Interface       Date:  2012-05-23       Impact factor: 4.118

2.  Preparation and Culture of Organotypic Hippocampal Slices for the Analysis of Brain Metastasis and Primary Brain Tumor Growth.

Authors:  Faramarz Dehghani; Carsten Hagemann; Ellina Schulz; Tim Hohmann; Urszula Hohmann; Ralf-Ingo Ernestus; Mario Löhr
Journal:  Methods Mol Biol       Date:  2021

3.  The Effect of Gradations in Mineral Content, Matrix Alignment, and Applied Strain on Human Mesenchymal Stem Cell Morphology within Collagen Biomaterials.

Authors:  Laura C Mozdzen; Stephen D Thorpe; Hazel R C Screen; Brendan A C Harley
Journal:  Adv Healthc Mater       Date:  2016-06-01       Impact factor: 9.933

4.  CELL TRACKING USING PARTICLE FILTERS WITH IMPLICIT CONVEX SHAPE MODEL IN 4D CONFOCAL MICROSCOPY IMAGES.

Authors:  Nisha Ramesh; Tolga Tasdizen
Journal:  Proc Int Conf Image Proc       Date:  2014-10

5.  Impact of MACC1 on human malignant glioma progression and patients' unfavorable prognosis.

Authors:  Carsten Hagemann; Steffen Fuchs; Camelia M Monoranu; Pia Herrmann; Janice Smith; Tim Hohmann; Urszula Grabiec; Almuth F Kessler; Faramarz Dehghani; Mario Löhr; Ralf-Ingo Ernestus; Giles H Vince; Ulrike Stein
Journal:  Neuro Oncol       Date:  2013-11-11       Impact factor: 12.300

6.  A 2D/3D image analysis system to track fluorescently labeled structures in rod-shaped cells: application to measure spindle pole asymmetry during mitosis.

Authors:  Daniel Schmitter; Paulina Wachowicz; Daniel Sage; Anastasia Chasapi; Ioannis Xenarios; Michael Unser
Journal:  Cell Div       Date:  2013-04-27       Impact factor: 5.130

7.  ATMAD: robust image analysis for Automatic Tissue MicroArray De-arraying.

Authors:  Hoai Nam Nguyen; Vincent Paveau; Cyril Cauchois; Charles Kervrann
Journal:  BMC Bioinformatics       Date:  2018-04-19       Impact factor: 3.169

8.  Accurate Morphology Preserving Segmentation of Overlapping Cells based on Active Contours.

Authors:  Csaba Molnar; Ian H Jermyn; Zoltan Kato; Vesa Rahkama; Päivi Östling; Piia Mikkonen; Vilja Pietiäinen; Peter Horvath
Journal:  Sci Rep       Date:  2016-08-26       Impact factor: 4.379

9.  Detecting and segmenting cell nuclei in two-dimensional microscopy images.

Authors:  Chi Liu; Fei Shang; John A Ozolek; Gustavo K Rohde
Journal:  J Pathol Inform       Date:  2016-10-21
  9 in total

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