Literature DB >> 20512978

Structural basis for the negative regulation of bacterial stress response by RseB.

Dong Young Kim1, Eunju Kwon, Jongkeun Choi, Hye-Yeon Hwang, Kyeong Kyu Kim.   

Abstract

The sigmaE-dependent stress response in bacterial cells is initiated by the DegS- and RseP-regulated intramembrane proteolysis of a membrane-spanning antisigma factor, RseA. RseB binds to RseA and inhibits its sequential cleavage, thereby functioning as a negative modulator of this response. In the crystal structure of the periplasmic domain of RseA bound to RseB, the DegS cleavage site of RseA is unstructured, however, its P1 residue is buried in the hydrophobic pocket of RseB, which suggests that RseB binding blocks the access of DegS to the cleavage site.

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Year:  2010        PMID: 20512978      PMCID: PMC2895250          DOI: 10.1002/pro.393

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  20 in total

Review 1.  Regulated intramembrane proteolysis: a control mechanism conserved from bacteria to humans.

Authors:  M S Brown; J Ye; R B Rawson; J L Goldstein
Journal:  Cell       Date:  2000-02-18       Impact factor: 41.582

2.  RseB binding to the periplasmic domain of RseA modulates the RseA:sigmaE interaction in the cytoplasm and the availability of sigmaE.RNA polymerase.

Authors:  B Collinet; H Yuzawa; T Chen; C Herrera; D Missiakas
Journal:  J Biol Chem       Date:  2000-10-27       Impact factor: 5.157

3.  OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain.

Authors:  Nathan P Walsh; Benjamin M Alba; Baundauna Bose; Carol A Gross; Robert T Sauer
Journal:  Cell       Date:  2003-04-04       Impact factor: 41.582

4.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

5.  Modulating substrate choice: the SspB adaptor delivers a regulator of the extracytoplasmic-stress response to the AAA+ protease ClpXP for degradation.

Authors:  Julia M Flynn; Igor Levchenko; Robert T Sauer; Tania A Baker
Journal:  Genes Dev       Date:  2004-09-15       Impact factor: 11.361

6.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

7.  Fine-tuning of the Escherichia coli sigmaE envelope stress response relies on multiple mechanisms to inhibit signal-independent proteolysis of the transmembrane anti-sigma factor, RseA.

Authors:  Irina L Grigorova; Rachna Chaba; Hong Ji Zhong; Benjamin M Alba; Virgil Rhodius; Christophe Herman; Carol A Gross
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

8.  Design principles of the proteolytic cascade governing the sigmaE-mediated envelope stress response in Escherichia coli: keys to graded, buffered, and rapid signal transduction.

Authors:  Rachna Chaba; Irina L Grigorova; Julia M Flynn; Tania A Baker; Carol A Gross
Journal:  Genes Dev       Date:  2007-01-01       Impact factor: 11.361

9.  DegS and YaeL participate sequentially in the cleavage of RseA to activate the sigma(E)-dependent extracytoplasmic stress response.

Authors:  Benjamin M Alba; Jennifer A Leeds; Christina Onufryk; Chi Zen Lu; Carol A Gross
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

10.  YaeL (EcfE) activates the sigma(E) pathway of stress response through a site-2 cleavage of anti-sigma(E), RseA.

Authors:  Kazue Kanehara; Koreaki Ito; Yoshinori Akiyama
Journal:  Genes Dev       Date:  2002-08-15       Impact factor: 11.361

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  12 in total

1.  Insights into the extracytoplasmic stress response of Xanthomonas campestris pv. campestris: role and regulation of {sigma}E-dependent activity.

Authors:  Patricia Bordes; Laure Lavatine; Kounthéa Phok; Roland Barriot; Alice Boulanger; Marie-Pierre Castanié-Cornet; Guillaume Déjean; Emmanuelle Lauber; Anke Becker; Matthieu Arlat; Claude Gutierrez
Journal:  J Bacteriol       Date:  2010-10-22       Impact factor: 3.490

Review 2.  Two stress sensor proteins for the expression of sigmaE regulon: DegS and RseB.

Authors:  Dong Young Kim
Journal:  J Microbiol       Date:  2015-05-03       Impact factor: 3.422

3.  Recognition of β-strand motifs by RseB is required for σ(E) activity in Escherichia coli.

Authors:  Adam Kulp; Meta J Kuehn
Journal:  J Bacteriol       Date:  2011-09-09       Impact factor: 3.490

Review 4.  Extra cytoplasmic function σ factor activation.

Authors:  Theresa D Ho; Craig D Ellermeier
Journal:  Curr Opin Microbiol       Date:  2012-02-28       Impact factor: 7.934

Review 5.  Stress-induced remodeling of the bacterial proteome.

Authors:  Monica S Guo; Carol A Gross
Journal:  Curr Biol       Date:  2014-05-19       Impact factor: 10.834

Review 6.  Making a beta-barrel: assembly of outer membrane proteins in Gram-negative bacteria.

Authors:  Nathan W Rigel; Thomas J Silhavy
Journal:  Curr Opin Microbiol       Date:  2012-01-03       Impact factor: 7.934

Review 7.  Biochemical and structural insights into intramembrane metalloprotease mechanisms.

Authors:  Lee Kroos; Yoshinori Akiyama
Journal:  Biochim Biophys Acta       Date:  2013-12

8.  Bacillus subtilis Intramembrane Protease RasP Activity in Escherichia coli and In Vitro.

Authors:  Daniel Parrell; Yang Zhang; Sandra Olenic; Lee Kroos
Journal:  J Bacteriol       Date:  2017-09-05       Impact factor: 3.490

9.  Structural basis of cell-surface signaling by a conserved sigma regulator in Gram-negative bacteria.

Authors:  Jaime L Jensen; Beau D Jernberg; Sangita C Sinha; Christopher L Colbert
Journal:  J Biol Chem       Date:  2020-02-26       Impact factor: 5.157

10.  New Insights into the Regulation of Cell-Surface Signaling Activity Acquired from a Mutagenesis Screen of the Pseudomonas putida IutY Sigma/Anti-Sigma Factor.

Authors:  Karlijn C Bastiaansen; Cristina Civantos; Wilbert Bitter; María A Llamas
Journal:  Front Microbiol       Date:  2017-05-02       Impact factor: 5.640

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