Literature DB >> 20507458

Laser capture microdissection: a novel approach to microanalysis of plant-microbe interactions.

Kerry Ramsay1, Michael G K Jones, Zhaohui Wang.   

Abstract

SUMMARY Gene expression studies are often carried out at the whole organism, organ or tissue levels. The different cell types present in most tissue exhibit different patterns of gene expression. This limits analyses because results obtained represent an average of the activities of the different cell types, and may lead to masking of genes of interest that are specifically expressed in a particular cell type. The recent development of laser capture microdissection (LCM) now enables target cells to be isolated from complex tissues and allows analysis of specific cell types that represent the in vivo state at the time of sample extraction. LCM has been applied to analyse plant tissues in a number of studies. This review illustrates the application of LCM in studies on gene expression profiling and proteomics, and also in research on plant-microbe interactions.

Year:  2006        PMID: 20507458     DOI: 10.1111/j.1364-3703.2006.00348.x

Source DB:  PubMed          Journal:  Mol Plant Pathol        ISSN: 1364-3703            Impact factor:   5.663


  7 in total

1.  Subtissue-specific evaluation of promoter efficiency by quantitative fluorometric assay in laser microdissected tissues of rapeseed.

Authors:  Jan Jasik; Silke Schiebold; Hardy Rolletschek; Peter Denolf; Katrien Van Adenhove; Thomas Altmann; Ljudmilla Borisjuk
Journal:  Plant Physiol       Date:  2011-08-08       Impact factor: 8.340

2.  Identification of soybean microRNAs involved in soybean cyst nematode infection by deep sequencing.

Authors:  Xiaoyan Li; Xue Wang; Shaopeng Zhang; Dawei Liu; Yuxi Duan; Wei Dong
Journal:  PLoS One       Date:  2012-06-27       Impact factor: 3.240

3.  Utilization of a Conidia-Deficient Mutant to Study Sexual Development in Fusarium graminearum.

Authors:  Hokyoung Son; Jae Yun Lim; Yoonji Lee; Yin-Won Lee
Journal:  PLoS One       Date:  2016-05-13       Impact factor: 3.240

4.  Characterization of WRKY co-regulatory networks in rice and Arabidopsis.

Authors:  Stefano Berri; Pamela Abbruscato; Odile Faivre-Rampant; Ana C M Brasileiro; Irene Fumasoni; Kouji Satoh; Shoshi Kikuchi; Luca Mizzi; Piero Morandini; Mario Enrico Pè; Pietro Piffanelli
Journal:  BMC Plant Biol       Date:  2009-09-22       Impact factor: 4.215

5.  Altered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection.

Authors:  Mohan Babu; Jonathan S Griffiths; Tyng-Shyan Huang; Aiming Wang
Journal:  BMC Genomics       Date:  2008-07-09       Impact factor: 3.969

6.  Microscopic and Proteomic Analysis of Dissected Developing Barley Endosperm Layers Reveals the Starchy Endosperm as Prominent Storage Tissue for ER-Derived Hordeins Alongside the Accumulation of Barley Protein Disulfide Isomerase (HvPDIL1-1).

Authors:  Valentin Roustan; Pierre-Jean Roustan; Marieluise Weidinger; Siegfried Reipert; Eszter Kapusi; Azita Shabrangy; Eva Stoger; Wolfram Weckwerth; Verena Ibl
Journal:  Front Plant Sci       Date:  2018-09-10       Impact factor: 5.753

7.  Laser capture microdissection to study Bacillus cereus iron homeostasis gene expression during Galleria mellonella in vivo gut colonization.

Authors:  Laurent Consentino; Agnès Rejasse; Nicolas Crapart; Claudia Bevilacqua; Christina Nielsen-LeRoux
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

  7 in total

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