Literature DB >> 20507437

Upstream open reading frames of the barley Mla13 powdery mildew resistance gene function co-operatively to down-regulate translation.

Dennis A Halterman1, Roger P Wise.   

Abstract

SUMMARY To protect themselves against pathogen infection, plants have evolved multifarious defence mechanisms that include the production of antimicrobial compounds and hypersensitive cell death. This defence includes the regulation of expression of resistance proteins, which function to detect pathogen effectors and control the response. Barley Mla is one of several Ml genes that confer specific resistance to the powdery mildew fungus, Blumeria graminis f. sp. hordei. The Mla13 allele contains a long (523 nt) transcript leader region with three upstream open reading frames (uORFs) and two alternatively spliced introns. The lengths of the Mla13 uORFs, which encode up to 70 amino acid peptides, are directly influenced by the splicing of these introns. We have used in vivo and in vitro translation assays to show that Mla13 uORFs function co-operatively to down-regulate translation of the parent cistron up to 13-fold. However, resistance conferred by constitutively transcribed Mla appears to be unaffected by removal of these uORFs, signifying that a potential increase in MLA13 protein is innocuous to barley cells. In addition, cells that possess a predicted increase in MLA13 translation via over-expression and uORF mutation retain their requirement for RAR1, suggesting that this increase is not sufficient to overcome the concentration threshold required for activation of RAR1-independent resistance.

Entities:  

Year:  2006        PMID: 20507437     DOI: 10.1111/j.1364-3703.2006.00329.x

Source DB:  PubMed          Journal:  Mol Plant Pathol        ISSN: 1364-3703            Impact factor:   5.663


  6 in total

1.  Alternative splicing and mRNA levels of the disease resistance gene RPS4 are induced during defense responses.

Authors:  Xue-Cheng Zhang; Walter Gassmann
Journal:  Plant Physiol       Date:  2007-10-19       Impact factor: 8.340

2.  The M flax rust resistance pre-mRNA is alternatively spliced and contains a complex upstream untranslated region.

Authors:  Simon Schmidt; Maria Lombardi; Donald M Gardiner; Michael Ayliffe; Peter A Anderson
Journal:  Theor Appl Genet       Date:  2007-05-30       Impact factor: 5.574

3.  Variation in upstream open reading frames contributes to allelic diversity in maize protein abundance.

Authors:  Joseph L Gage; Sujina Mali; Fionn McLoughlin; Merritt Khaipho-Burch; Brandon Monier; Julia Bailey-Serres; Richard D Vierstra; Edward S Buckler
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-29       Impact factor: 12.779

4.  FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences.

Authors:  Sagnik Banerjee; Priyanka Bhandary; Margaret Woodhouse; Taner Z Sen; Roger P Wise; Carson M Andorf
Journal:  BMC Bioinformatics       Date:  2021-04-20       Impact factor: 3.169

5.  Identification of wheat gene Sr35 that confers resistance to Ug99 stem rust race group.

Authors:  Cyrille Saintenac; Wenjun Zhang; Eduard Akhunov; Jorge Dubcovsky; Andres Salcedo; Matthew N Rouse; Harold N Trick
Journal:  Science       Date:  2013-06-27       Impact factor: 47.728

Review 6.  Alternative splicing in plant immunity.

Authors:  Shengming Yang; Fang Tang; Hongyan Zhu
Journal:  Int J Mol Sci       Date:  2014-06-10       Impact factor: 5.923

  6 in total

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