Literature DB >> 20507063

Fluorometric quantification of natural inorganic polyphosphate.

Julia M Diaz1, Ellery D Ingall.   

Abstract

Polyphosphate, a linear polymer of orthophosphate, is abundant in the environment and a key component in wastewater treatment and many bioremediation processes. Despite the broad relevance of polyphosphate, current methods to quantify it possess significant disadvantages. Here, we describe a new approach for the direct quantification of inorganic polyphosphate in complex natural samples. The protocol relies on the interaction between the fluorochrome 4',6-diamidino-2-phenylindole (DAPI) and dissolved polyphosphate. With the DAPI-based approach we describe, polyphosphate can be quantified at concentrations ranging from 0.5-3 microM P in a neutral-buffered freshwater matrix with an accuracy of +/-0.03 microM P. The patterns of polyphosphate concentration versus fluorescence yielded by standards exhibit no chain length dependence across polyphosphates ranging from 15-130 phosphorus units in size. Shorter length polyphosphate molecules (e.g., polyphosphate of three and five phosphorus units in length) contribute little to no signal in this approach, as these molecules react only slightly or not at all with DAPI in the concentration range tested. The presence of salt suppresses fluorescence from intermediate polyphosphate chain lengths (e.g., 15 phosphorus units) at polyphosphate concentrations ranging from 0.5-3 microM P. For longer chain lengths (e.g., 45-130 phosphorus units), this salt interference is not evident at conductivities up to approximately 10mS/cm. Our results indicate that standard polyphosphates should be stored frozen for no longer than 10-15 days to avoid inconsistent results associated with standard degradation. We have applied the fluorometric protocol to the analysis of five well-characterized natural samples to demonstrate the use of the method.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20507063     DOI: 10.1021/es100191h

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  11 in total

1.  Polyphosphate goes from pedestrian to prominent in the marine P-cycle.

Authors:  Karin M Björkman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

2.  Inorganic polyphosphate accumulation suppresses the dormancy response and virulence in Mycobacterium tuberculosis.

Authors:  Prabhakar Tiwari; Tannu Priya Gosain; Mamta Singh; Gaurav D Sankhe; Garima Arora; Saqib Kidwai; Sakshi Agarwal; Saurabh Chugh; Deepak K Saini; Ramandeep Singh
Journal:  J Biol Chem       Date:  2019-05-21       Impact factor: 5.157

Review 3.  Polyphosphate: an ancient molecule that links platelets, coagulation, and inflammation.

Authors:  James H Morrissey; Sharon H Choi; Stephanie A Smith
Journal:  Blood       Date:  2012-04-19       Impact factor: 22.113

4.  [A fluorometric method for direct detection of inorganic polyphosphate in enterohemorrhagic Escherichia coli O157:H7].

Authors:  Yanli Du; Zongli Han; Xiangyu Wang; Chengsong Wan
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2019-03-30

5.  Fluorometric quantification of polyphosphate in environmental plankton samples: extraction protocols, matrix effects, and nucleic acid interference.

Authors:  Patrick Martin; Benjamin A S Van Mooy
Journal:  Appl Environ Microbiol       Date:  2012-10-26       Impact factor: 4.792

6.  The exopolyphosphatase TbrPPX1 of Trypanosoma brucei.

Authors:  Edith Luginbuehl; Stefan Kunz; Laurent Wentzinger; Florian Freimoser; Thomas Seebeck
Journal:  BMC Microbiol       Date:  2011-01-06       Impact factor: 3.605

7.  Phosphorus K-edge XANES spectroscopy of mineral standards.

Authors:  Ellery D Ingall; Jay A Brandes; Julia M Diaz; Martin D de Jonge; David Paterson; Ian McNulty; W Crawford Elliott; Paul Northrup
Journal:  J Synchrotron Radiat       Date:  2010-12-02       Impact factor: 2.616

8.  Positively-charged semi-tunnel is a structural and surface characteristic of polyphosphate-binding proteins: an in-silico study.

Authors:  Zheng Zachory Wei; Greg Vatcher; Alvin Hok Yan Tin; Jun Lin Teng; Juan Wang; Qing Hua Cui; Jian Guo Chen; Albert Cheung Hoi Yu
Journal:  PLoS One       Date:  2015-04-16       Impact factor: 3.240

9.  New insights into the in situ microscopic visualization and quantification of inorganic polyphosphate stores by 4',6-diamidino-2-phenylindole (DAPI)-staining.

Authors:  F M Gomes; I B Ramos; C Wendt; W Girard-Dias; W De Souza; E A Machado; K Miranda
Journal:  Eur J Histochem       Date:  2013-11-05       Impact factor: 3.188

10.  The Macromolecular Basis of Phytoplankton C:N:P Under Nitrogen Starvation.

Authors:  Justin D Liefer; Aneri Garg; Matthew H Fyfe; Andrew J Irwin; Ina Benner; Christopher M Brown; Michael J Follows; Anne Willem Omta; Zoe V Finkel
Journal:  Front Microbiol       Date:  2019-04-17       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.