Literature DB >> 2050121

Requirement for acidic amino acid residues immediately N-terminal to the conserved domain of Saccharomyces cerevisiae TFIID.

Q A Zhou1, M C Schmidt, A J Berk.   

Abstract

TFIID binds to TATA boxes and initiates the assembly of general transcription factors and pol II on promoters. TFIID proteins from various species consist of a highly conserved carboxy terminal domain and very divergent amino terminal domains. We investigated the function of the non-conserved amino terminal domain (residues 1-60) of Saccharomyces cerevisiae TFIID (YIID, 240 residues) by testing the ability of a series of YIID amino terminal deletion mutants to complement a YIID deficient yeast strain. Mutants with deletions up to amino acid 48 restored the YIID deficient yeast strain to an apparently wild type phenotype. However, deletion up to position 57 or 60 produced yeast strains which formed extremely small colonies. Moreover, overexpression of YIID delta 2-57 or YIID delta 3-60 protein in the presence of wild type YIID resulted in a dominant-negative inhibition of growth. No difference between the basal transcriptional activity of wild type YIID and these amino terminal deletion mutants was observed in vitro. However, transcriptional activation in vivo of promoter-lacZ fusions showed that the YIID delta 2-57 deletion affects the ability of certain promoters (CUP1 and an HSP UAS-CYC1 promoter hybrid promoter) to respond to upstream factor stimulation. At least one inducible promoter, PHO5, was not affected by this deletion. The defect produced by YIID delta 2-57 was due to the deletion of several acidic residues present between residues 48 and 57. The results show that the conserved carboxy terminal domain of YIID is sufficient for cell viability. However, an acidic region just amino terminal to the conserved domain is required for normal growth and transcription control in most yeast strains.

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Year:  1991        PMID: 2050121      PMCID: PMC452859          DOI: 10.1002/j.1460-2075.1991.tb07710.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  35 in total

1.  Arabidopsis thaliana contains two genes for TFIID.

Authors:  A Gasch; A Hoffmann; M Horikoshi; R G Roeder; N H Chua
Journal:  Nature       Date:  1990-07-26       Impact factor: 49.962

2.  Striking conservation of TFIID in Schizosaccharomyces pombe and Saccharomyces cerevisiae.

Authors:  J D Fikes; D M Becker; F Winston; L Guarente
Journal:  Nature       Date:  1990-07-19       Impact factor: 49.962

3.  Evidence for a heat shock transcription factor-independent mechanism for heat shock induction of transcription in Saccharomyces cerevisiae.

Authors:  N Kobayashi; K McEntee
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

Review 4.  Regulation of inducible and tissue-specific gene expression.

Authors:  T Maniatis; S Goodbourn; J A Fischer
Journal:  Science       Date:  1987-06-05       Impact factor: 47.728

5.  The organization and transcription of the galactose gene cluster of Saccharomyces.

Authors:  T P St John; R W Davis
Journal:  J Mol Biol       Date:  1981-10-25       Impact factor: 5.469

6.  Nucleotide sequence of yeast LEU2 shows 5'-noncoding region has sequences cognate to leucine.

Authors:  A Andreadis; Y P Hsu; G B Kohlhaw; P Schimmel
Journal:  Cell       Date:  1982-12       Impact factor: 41.582

7.  Cloning of the Schizosaccharomyces pombe TFIID gene reveals a strong conservation of functional domains present in Saccharomyces cerevisiae TFIID.

Authors:  A Hoffmann; M Horikoshi; C K Wang; S Schroeder; P A Weil; R G Roeder
Journal:  Genes Dev       Date:  1990-07       Impact factor: 11.361

8.  Saccharomyces cerevisiae PHO5 promoter region: location and function of the upstream activation site.

Authors:  J Nakao; A Miyanohara; A Toh-e; K Matsubara
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

9.  Two distinct domains in the yeast transcription factor IID and evidence for a TATA box-induced conformational change.

Authors:  P M Lieberman; M C Schmidt; C C Kao; A J Berk
Journal:  Mol Cell Biol       Date:  1991-01       Impact factor: 4.272

10.  Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID).

Authors:  A Hoffman; E Sinn; T Yamamoto; J Wang; A Roy; M Horikoshi; R G Roeder
Journal:  Nature       Date:  1990-07-26       Impact factor: 49.962

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  22 in total

1.  TFIIA induces conformational changes in TFIID via interactions with the basic repeat.

Authors:  D K Lee; J DeJong; S Hashimoto; M Horikoshi; R G Roeder
Journal:  Mol Cell Biol       Date:  1992-11       Impact factor: 4.272

2.  Isolation and characterization of a cDNA clone encoding the TATA box-binding protein (TFIID) from wheat.

Authors:  T Kawata; M Minami; T Tamura; K Sumita; M Iwabuchi
Journal:  Plant Mol Biol       Date:  1992-08       Impact factor: 4.076

3.  Transcription factor TFIID induces DNA bending upon binding to the TATA element.

Authors:  M Horikoshi; C Bertuccioli; R Takada; J Wang; T Yamamoto; R G Roeder
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-01       Impact factor: 11.205

4.  The Drosophila TATA binding protein contains a strong but masked activation domain.

Authors:  M Um; J L Manley
Journal:  Gene Expr       Date:  2000

5.  Shutoff of RNA polymerase II transcription by poliovirus involves 3C protease-mediated cleavage of the TATA-binding protein at an alternative site: incomplete shutoff of transcription interferes with efficient viral replication.

Authors:  Pallob Kundu; Santanu Raychaudhuri; Weimin Tsai; Asim Dasgupta
Journal:  J Virol       Date:  2005-08       Impact factor: 5.103

6.  Evolution of sequence repetition and gene duplications in the TATA-binding protein TBP (TFIID).

Authors:  J M Hancock
Journal:  Nucleic Acids Res       Date:  1993-06-25       Impact factor: 16.971

7.  Effect of the non-conserved N-terminus on the DNA binding activity of the yeast TATA binding protein.

Authors:  R Kuddus; M C Schmidt
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

8.  Isolation of STD1, a high-copy-number suppressor of a dominant negative mutation in the yeast TATA-binding protein.

Authors:  R W Ganster; W Shen; M C Schmidt
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

9.  DNA-binding properties of cloned TATA-binding protein from potato tubers.

Authors:  M J Holdsworth; C Grierson; W Schuch; M Bevan
Journal:  Plant Mol Biol       Date:  1992-06       Impact factor: 4.076

10.  The conserved core domain of the human TATA binding protein is sufficient to assemble the multisubunit RNA polymerase I-specific transcription factor SL1.

Authors:  U Rudloff; D Eberhard; I Grummt
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-16       Impact factor: 11.205

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