Literature DB >> 20499253

Genetic determinants of autism in individuals with deletions of 18q.

Louise O'Donnell1, Bridgette Soileau, Patricia Heard, Erika Carter, Courtney Sebold, Jon Gelfond, Daniel E Hale, Jannine D Cody.   

Abstract

Previous research has suggested that individuals with constitutional hemizygosity of 18q have a higher risk of autistic-like behaviors. We sought to identify genomic factors located on chromosome 18 as well as other loci that correlate with autistic behaviors. One hundred and five individuals with 18q- were assessed by high-resolution oligo aCGH and by parental ratings of behavior on the Gilliam Autism Rating Scale. Forty-five individuals (43%) had scores within the "possibly" or "very likely" categories of risk for an autism diagnosis. We searched for genetic determinants of autism by (1) identifying additional chromosome copy number changes (2) Identifying common regions of hemizygosity on 18q, and (3) evaluating four regions containing candidate genes located on 18q (MBD1, TCF4, NETO1, FBXO15). Three individuals with a "very likely" probability of autism had a captured 17p telomere in addition to the 18q deletion suggesting a possible synergy between hemizygosity of 18q and trigosity of 17p. In addition, two of the individuals with an 18q deletion and a "very likely" probability of autism rating had a duplication of the entire short arm of chromosome 18. Although no common region of hemizygosity on 18q was identified, analysis of four regions containing candidate genes suggested that individuals were significantly more likely to exhibit autistic-like behaviors if their region of hemizygosity included TCF4, NETO1, and FBXO15 than if they had any other combination of hemizygosity of the candidate genes. Taken together, these findings identify several new potential candidate genes or regions for autistic behaviors.

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Year:  2010        PMID: 20499253     DOI: 10.1007/s00439-010-0839-y

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  37 in total

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Journal:  Am J Hum Genet       Date:  2008-01-17       Impact factor: 11.025

2.  Mutations in TCF4, encoding a class I basic helix-loop-helix transcription factor, are responsible for Pitt-Hopkins syndrome, a severe epileptic encephalopathy associated with autonomic dysfunction.

Authors:  Jeanne Amiel; Marlene Rio; Loic de Pontual; Richard Redon; Valerie Malan; Nathalie Boddaert; Perrine Plouin; Nigel P Carter; Stanislas Lyonnet; Arnold Munnich; Laurence Colleaux
Journal:  Am J Hum Genet       Date:  2007-03-23       Impact factor: 11.025

3.  Haploinsufficiency of TCF4 causes syndromal mental retardation with intermittent hyperventilation (Pitt-Hopkins syndrome).

Authors:  Christiane Zweier; Maarit M Peippo; Juliane Hoyer; Sergio Sousa; Armand Bottani; Jill Clayton-Smith; William Reardon; Jorge Saraiva; Alexandra Cabral; Ina Gohring; Koen Devriendt; Thomy de Ravel; Emilia K Bijlsma; Raoul C M Hennekam; Alfredo Orrico; Monika Cohen; Alexander Dreweke; Andre Reis; Peter Nurnberg; Anita Rauch
Journal:  Am J Hum Genet       Date:  2007-03-23       Impact factor: 11.025

4.  Narrowing critical regions and determining penetrance for selected 18q- phenotypes.

Authors:  Jannine D Cody; Patricia L Heard; Analisa C Crandall; Erika M Carter; John Li; L Jean Hardies; Jack Lancaster; Brian Perry; Robert F Stratton; Courtney Sebold; Rebecca L Schaub; Bridgette Soileau; Annice Hill; Minire Hasi; Peter T Fox; Daniel E Hale
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5.  Strong association of de novo copy number mutations with autism.

Authors:  Jonathan Sebat; B Lakshmi; Dheeraj Malhotra; Jennifer Troge; Christa Lese-Martin; Tom Walsh; Boris Yamrom; Seungtai Yoon; Alex Krasnitz; Jude Kendall; Anthony Leotta; Deepa Pai; Ray Zhang; Yoon-Ha Lee; James Hicks; Sarah J Spence; Annette T Lee; Kaija Puura; Terho Lehtimäki; David Ledbetter; Peter K Gregersen; Joel Bregman; James S Sutcliffe; Vaidehi Jobanputra; Wendy Chung; Dorothy Warburton; Mary-Claire King; David Skuse; Daniel H Geschwind; T Conrad Gilliam; Kenny Ye; Michael Wigler
Journal:  Science       Date:  2007-03-15       Impact factor: 47.728

6.  Novel submicroscopic chromosomal abnormalities detected in autism spectrum disorder.

Authors:  Susan L Christian; Camille W Brune; Jyotsna Sudi; Ravinesh A Kumar; Shaung Liu; Samer Karamohamed; Judith A Badner; Seiichi Matsui; Jeffrey Conroy; Devin McQuaid; James Gergel; Eli Hatchwell; T Conrad Gilliam; Elliot S Gershon; Norma J Nowak; William B Dobyns; Edwin H Cook
Journal:  Biol Psychiatry       Date:  2008-03-28       Impact factor: 13.382

Review 7.  Epidemiological surveys of autism and other pervasive developmental disorders: an update.

Authors:  Eric Fombonne
Journal:  J Autism Dev Disord       Date:  2003-08

Review 8.  Partial trisomy of the short arm of chromosome 18 due to inversion duplication and direct duplication.

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Journal:  Clin Genet       Date:  1994-12       Impact factor: 4.438

Review 9.  Sibs with tetrasomy 18p born to a mother with trisomy 18p.

Authors:  K Takeda; T Okamura; T Hasegawa
Journal:  J Med Genet       Date:  1989-03       Impact factor: 6.318

10.  Mapping and sequencing of structural variation from eight human genomes.

Authors:  Jeffrey M Kidd; Gregory M Cooper; William F Donahue; Hillary S Hayden; Nick Sampas; Tina Graves; Nancy Hansen; Brian Teague; Can Alkan; Francesca Antonacci; Eric Haugen; Troy Zerr; N Alice Yamada; Peter Tsang; Tera L Newman; Eray Tüzün; Ze Cheng; Heather M Ebling; Nadeem Tusneem; Robert David; Will Gillett; Karen A Phelps; Molly Weaver; David Saranga; Adrianne Brand; Wei Tao; Erik Gustafson; Kevin McKernan; Lin Chen; Maika Malig; Joshua D Smith; Joshua M Korn; Steven A McCarroll; David A Altshuler; Daniel A Peiffer; Michael Dorschner; John Stamatoyannopoulos; David Schwartz; Deborah A Nickerson; James C Mullikin; Richard K Wilson; Laurakay Bruhn; Maynard V Olson; Rajinder Kaul; Douglas R Smith; Evan E Eichler
Journal:  Nature       Date:  2008-05-01       Impact factor: 49.962

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  10 in total

1.  The role of the TCF4 gene in the phenotype of individuals with 18q segmental deletions.

Authors:  Minire Hasi; Bridgette Soileau; Courtney Sebold; Annice Hill; Daniel E Hale; Louise O'Donnell; Jannine D Cody
Journal:  Hum Genet       Date:  2011-06-14       Impact factor: 4.132

2.  WNT/β-Catenin Pathway and Epigenetic Mechanisms Regulate the Pitt-Hopkins Syndrome and Schizophrenia Risk Gene TCF4.

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3.  Transcription factor 4 gene rs9960767 polymorphism in bipolar disorder.

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Journal:  Biomed Rep       Date:  2016-08-23

4.  18q deletion in a cystic fibrosis infant, increased morbidity and challenge for correct treatment choices: a case report.

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Journal:  Ital J Pediatr       Date:  2011-05-17       Impact factor: 2.638

5.  A case control association study and cognitive function analysis of neuropilin and tolloid-like 1 gene and schizophrenia in the Japanese population.

Authors:  Masahiro Banno; Takayoshi Koide; Branko Aleksic; Kazuo Yamada; Tsutomu Kikuchi; Kunihiro Kohmura; Yasunori Adachi; Naoko Kawano; Itaru Kushima; Masashi Ikeda; Toshiya Inada; Takeo Yoshikawa; Nakao Iwata; Norio Ozaki
Journal:  PLoS One       Date:  2011-12-20       Impact factor: 3.240

6.  Diagnostic yield of array CGH in patients with autism spectrum disorder in Hong Kong.

Authors:  Wai-Kwan Siu; Ching-Wan Lam; Chloe Miu Mak; Elizabeth Tak-Kwong Lau; Mary Hoi-Yin Tang; Wing-Fai Tang; Rachel Sui-Man Poon-Mak; Chi-Chiu Lee; Se-Fong Hung; Patrick Wing-Leung Leung; Karen Ling Kwong; Eric Kin-Cheong Yau; Grace Sui-Fun Ng; Nai-Chung Fong; Kwok-Yin Chan
Journal:  Clin Transl Med       Date:  2016-05-16

7.  Developmental IL-6 Exposure Favors Production of PDGF-Responsive Multipotential Progenitors at the Expense of Neural Stem Cells and Other Progenitors.

Authors:  Ekta Kumari; Fernando J Velloso; Azadeh Nasuhidehnavi; Aditya Somasundaram; Vibha H Savanur; Krista D Buono; Steven W Levison
Journal:  Stem Cell Reports       Date:  2020-04-16       Impact factor: 7.765

8.  Genetic Polymorphisms in miR-137 and Its Target Genes, TCF4 and CACNA1C, Contribute to the Risk of Bipolar Disorder: A Preliminary Case-Control Study and Bioinformatics Analysis.

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9.  Importance and usage of chromosomal microarray analysis in diagnosing intellectual disability, global developmental delay, and autism; and discovering new loci for these disorders.

Authors:  Ahmet Cevdet Ceylan; Senol Citli; Haktan Bagis Erdem; Ibrahim Sahin; Elif Acar Arslan; Murat Erdogan
Journal:  Mol Cytogenet       Date:  2018-09-24       Impact factor: 2.009

10.  Increased Diagnostic Yield of Array Comparative Genomic Hybridization for Autism Spectrum Disorder in One Institution in Taiwan.

Authors:  Chung-Lin Lee; Chih-Kuang Chuang; Ru-Yi Tu; Huei-Ching Chiu; Yun-Ting Lo; Ya-Hui Chang; Yen-Jiun Chen; Chao-Ling Chou; Peih-Shan Wu; Chih-Ping Chen; Hsiang-Yu Lin; Shuan-Pei Lin
Journal:  Medicina (Kaunas)       Date:  2021-12-22       Impact factor: 2.430

  10 in total

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