Literature DB >> 20490971

Impact of thermodynamic principles in systems biology.

J J Heijnen1.   

Abstract

It is shown that properties of biological systems which are relevant for systems biology motivated mathematical modelling are strongly shaped by general thermodynamic principles such as osmotic limit, Gibbs energy dissipation, near equilibria and thermodynamic driving force. Each of these aspects will be demonstrated both theoretically and experimentally.

Mesh：

Year:  2010        PMID： 20490971     DOI： 10.1007/10_2009_63

Source DB:  PubMed          Journal:  Adv Biochem Eng Biotechnol        ISSN： 0724-6145            Impact factor:   2.635


  7 in total

Review 1.  Beyond the paradigm: Combining mass spectrometry and nuclear magnetic resonance for metabolomics.

Authors:  Darrell D Marshall; Robert Powers
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-01-11       Impact factor: 9.795

2.  Homeostasis of the biosynthetic E. coli metabolome.

Authors:  Dušica Radoš; Stefano Donati; Martin Lempp; Johanna Rapp; Hannes Link
Journal:  iScience       Date:  2022-06-02

3.  Thermodynamics and economic feasibility of acetone production from syngas using the thermophilic production host Moorella thermoacetica.

Authors:  Stephanie Redl; Sumesh Sukumara; Tom Ploeger; Liang Wu; Torbjørn Ølshøj Jensen; Alex Toftgaard Nielsen; Henk Noorman
Journal:  Biotechnol Biofuels       Date:  2017-06-12       Impact factor: 6.040

4.  Understanding biochemical design principles with ensembles of canonical non-linear models.

Authors:  Lukas Bromig; Andreas Kremling; Alberto Marin-Sanguino
Journal:  PLoS One       Date:  2020-04-30       Impact factor: 3.240

5.  New thermodynamic activity-based approach allows predicting the feasibility of glycolysis.

Authors:  Thorsten Greinert; Kristina Vogel; Thomas Maskow; Christoph Held
Journal:  Sci Rep       Date:  2021-03-17       Impact factor: 4.379

Review 6.  Nitrogen assimilation in Escherichia coli: putting molecular data into a systems perspective.

Authors:  Wally C van Heeswijk; Hans V Westerhoff; Fred C Boogerd
Journal:  Microbiol Mol Biol Rev       Date:  2013-12       Impact factor: 11.056

7.  Glycolytic strategy as a tradeoff between energy yield and protein cost.

Authors:  Avi Flamholz; Elad Noor; Arren Bar-Even; Wolfram Liebermeister; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205
  7 in total

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