Literature DB >> 20485534

{4-Phenyl-1-[1-(1,3-thia-zol-2-yl)ethyl-idene]-thio-semicarbazidato}{4-phenyl-1-[1-(1,3-thia-zol-2-yl)ethylidene]-thio-semi-carbazide}nickel(II) chloride mono-hydrate.

Ramaiyer Venkatraman, Md Alamgir Hossain, Frank R Fronczek.   

Abstract

In the title compound, [Ni(C(12)H(11)N(4)S(2))(C(12)n class="Species">H(12)N(4)S(2))]Cl·H(2)O, the Ni(II) ion is chelated by two 2-acetyl-thia-zole-3-phenyl-thio-semicarbazone ligands, forming a distorted octa-hedral complex. The metal ion is coordinated via the thia-zole nitro-gen, imine nitro-gen and thione sulfur atoms from each thio-semicarbazone ligand, and two coordinating units lie almost perpendicular to each other give dihedral angle = 81.89 (1)°]. One thio-semicarbazone unit is found to bind a chloride anion through two hydrogen bonds, while the other is linked with the disordered crystal water molecule. Two mol-ecules are connected to each other through an inter-molecular N-H⋯S inter-action, forming a centrosymmetric dimer. Dimers are linked into sheets by π-π stacking of two phenyl rings [shortest C⋯C distance = 4.041 (3) Å].

Entities:  

Year:  2010        PMID: 20485534      PMCID: PMC2872247          DOI: 10.1107/S1600536810013280

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to thio­semicarbazones and their metal complexes, see: Haiduc & Silverstru (1990 ▶); Nath et al. (2001 ▶); Padhye & Kauffman (1985 ▶); Pellerito & Nagy (2002 ▶); Ali & Livingstone (1974 ▶); Barros-García et al. (2005 ▶); Campbell (1975 ▶). For related structures, see: Ketcham et al. (2002 ▶); Lima et al. (1999 ▶); Viñuelas-Zahínos et al. (2008 ▶); Saeed et al. (2009 ▶); Venkatraman et al. (2009 ▶).

Experimental

Crystal data

[Ni(C12H11N4S2)(C12H12N4S2)]Cl·H2O M = 663.92 Triclinic, a = 8.5983 (15) Å b = 12.929 (2) Å c = 13.492 (2) Å α = 101.710 (8)° β = 90.168 (8)° γ = 98.946 (7)° V = 1449.9 (4) Å3 Z = 2 Mo Kα radiation μ = 1.08 mm−1 T = 90 K 0.33 × 0.27 × 0.08 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.716, T max = 0.918 31053 measured reflections 8823 independent reflections 7120 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.081 S = 1.03 8823 reflections 374 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.62 e Å−3 Data collection: COLLECT (Nonius 2000 ▶); cell refinement: DENZO and SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO and SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810013280/br2143sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013280/br2143Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C12H11N4S2)(C12H12N4S2)]Cl·H2OZ = 2
Mr = 663.92F(000) = 684
Triclinic, P1Dx = 1.521 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5983 (15) ÅCell parameters from 8157 reflections
b = 12.929 (2) Åθ = 2.5–30.5°
c = 13.492 (2) ŵ = 1.08 mm1
α = 101.710 (8)°T = 90 K
β = 90.168 (8)°Fragment, dark orange-red
γ = 98.946 (7)°0.33 × 0.27 × 0.08 mm
V = 1449.9 (4) Å3
Nonius KappaCCD diffractometer with an Oxford Cryosystems Cryostream cooler8823 independent reflections
Radiation source: fine-focus sealed tube7120 reflections with I > 2σ(I)
graphiteRint = 0.027
ω and φ scansθmax = 30.5°, θmin = 2.6°
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)h = −11→12
Tmin = 0.716, Tmax = 0.918k = −18→18
31053 measured reflectionsl = −18→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0317P)2 + 0.7508P] where P = (Fo2 + 2Fc2)/3
8823 reflections(Δ/σ)max = 0.001
374 parametersΔρmax = 0.46 e Å3
3 restraintsΔρmin = −0.62 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ni10.73755 (2)0.394293 (16)0.219421 (15)0.01278 (5)
S10.69340 (6)0.47956 (4)−0.08422 (3)0.02390 (10)
S20.85983 (5)0.45716 (3)0.38207 (3)0.01606 (8)
S30.28921 (6)0.38933 (4)0.38582 (5)0.03629 (13)
S40.93712 (5)0.28513 (3)0.16410 (3)0.01845 (9)
N10.66738 (17)0.38969 (11)0.06858 (10)0.0168 (3)
N20.84148 (16)0.54131 (10)0.20123 (10)0.0145 (3)
N30.92388 (16)0.61821 (11)0.27600 (10)0.0160 (3)
N41.01213 (17)0.65179 (11)0.44242 (10)0.0168 (3)
H4N1.009 (2)0.6270 (17)0.4923 (16)0.020*
N50.52775 (16)0.43701 (11)0.28172 (10)0.0160 (3)
N60.61975 (16)0.25083 (11)0.24132 (10)0.0155 (3)
N70.68555 (17)0.16005 (11)0.21622 (11)0.0189 (3)
H7N0.641 (2)0.1023 (18)0.2257 (15)0.023*
N80.89284 (18)0.07572 (12)0.17390 (12)0.0204 (3)
H8N0.823 (3)0.0229 (18)0.1878 (16)0.024*
C10.5889 (2)0.31759 (14)−0.01143 (13)0.0208 (3)
H10.53750.2487−0.00530.025*
C20.5902 (2)0.35226 (14)−0.10032 (13)0.0238 (4)
H20.54110.3118−0.16230.029*
C30.7296 (2)0.47931 (13)0.04134 (12)0.0175 (3)
C40.8216 (2)0.56675 (13)0.11410 (12)0.0178 (3)
C50.8832 (3)0.67237 (14)0.08888 (13)0.0272 (4)
H5A0.82060.72590.12210.041*
H5B0.87590.66630.01540.041*
H5C0.99350.69430.11260.041*
C60.93577 (18)0.58278 (12)0.36129 (12)0.0142 (3)
C71.0919 (2)0.75756 (13)0.45124 (12)0.0184 (3)
C81.1888 (3)0.78887 (16)0.37662 (15)0.0314 (4)
H81.19620.74050.31420.038*
C91.2748 (3)0.89174 (17)0.39429 (16)0.0383 (5)
H91.34320.91290.34430.046*
C101.2617 (3)0.96389 (17)0.48438 (16)0.0390 (5)
H101.31831.03470.49520.047*
C111.1656 (3)0.93179 (18)0.55803 (16)0.0430 (6)
H111.15610.98060.61980.052*
C121.0830 (3)0.82842 (16)0.54207 (14)0.0334 (5)
H121.01990.80610.59390.040*
C130.4732 (2)0.53104 (14)0.32056 (13)0.0203 (3)
H130.52210.59840.30880.024*
C140.3436 (2)0.51963 (16)0.37710 (15)0.0288 (4)
H140.29050.57650.40770.035*
C150.44159 (19)0.35541 (14)0.31114 (13)0.0188 (3)
C160.4887 (2)0.24947 (13)0.28841 (13)0.0195 (3)
C170.3995 (2)0.15581 (15)0.32400 (18)0.0336 (5)
H17A0.34410.10500.26610.050*
H17B0.32280.18040.37330.050*
H17C0.47310.12060.35590.050*
C180.83731 (19)0.16880 (13)0.18405 (12)0.0167 (3)
C191.0377 (2)0.04743 (14)0.13910 (13)0.0198 (3)
C201.1345 (2)0.09939 (15)0.07580 (14)0.0236 (4)
H201.10790.16130.05640.028*
C211.2697 (2)0.06037 (15)0.04129 (15)0.0265 (4)
H211.33590.0961−0.00170.032*
C221.3101 (2)−0.03042 (15)0.06854 (15)0.0274 (4)
H221.4035−0.05640.04470.033*
C231.2126 (2)−0.08261 (15)0.13097 (15)0.0263 (4)
H231.2389−0.14500.14950.032*
C241.0774 (2)−0.04432 (14)0.16631 (14)0.0226 (4)
H241.0113−0.08030.20910.027*
Cl10.61127 (5)−0.09146 (3)0.21252 (3)0.02521 (9)
O10.6845 (2)0.76617 (14)0.36670 (17)0.0455 (6)0.913 (4)
H010.662 (3)0.804 (2)0.326 (2)0.068*
H020.768 (3)0.754 (2)0.342 (2)0.068*
O1A0.524 (2)0.2403 (15)0.5062 (14)0.041 (6)*0.087 (4)
U11U22U33U12U13U23
Ni10.01436 (10)0.01070 (9)0.01427 (10)0.00209 (7)0.00101 (7)0.00476 (7)
S10.0373 (3)0.0193 (2)0.01466 (19)0.00106 (18)−0.00456 (17)0.00520 (15)
S20.01935 (19)0.01415 (18)0.01562 (18)0.00036 (14)−0.00207 (14)0.00703 (14)
S30.0315 (3)0.0256 (2)0.0568 (3)0.0120 (2)0.0271 (2)0.0142 (2)
S40.01769 (19)0.01322 (18)0.0258 (2)0.00322 (14)0.00702 (16)0.00654 (15)
N10.0201 (7)0.0132 (6)0.0174 (6)0.0027 (5)−0.0008 (5)0.0038 (5)
N20.0172 (6)0.0116 (6)0.0148 (6)0.0013 (5)0.0011 (5)0.0036 (5)
N30.0205 (7)0.0120 (6)0.0152 (6)−0.0004 (5)−0.0020 (5)0.0041 (5)
N40.0221 (7)0.0147 (6)0.0137 (6)−0.0005 (5)−0.0008 (5)0.0057 (5)
N50.0164 (6)0.0161 (6)0.0164 (6)0.0045 (5)−0.0003 (5)0.0037 (5)
N60.0161 (6)0.0122 (6)0.0185 (6)0.0030 (5)0.0004 (5)0.0034 (5)
N70.0192 (7)0.0099 (6)0.0288 (8)0.0025 (5)0.0060 (6)0.0066 (6)
N80.0206 (7)0.0138 (7)0.0296 (8)0.0055 (5)0.0081 (6)0.0089 (6)
C10.0238 (8)0.0153 (8)0.0220 (8)0.0027 (6)−0.0033 (7)0.0013 (6)
C20.0317 (10)0.0181 (8)0.0196 (8)0.0028 (7)−0.0055 (7)0.0004 (6)
C30.0230 (8)0.0164 (8)0.0141 (7)0.0035 (6)−0.0002 (6)0.0052 (6)
C40.0238 (8)0.0146 (7)0.0157 (7)0.0006 (6)0.0000 (6)0.0069 (6)
C50.0435 (11)0.0185 (8)0.0185 (8)−0.0065 (8)−0.0041 (8)0.0098 (7)
C60.0140 (7)0.0135 (7)0.0163 (7)0.0035 (6)0.0009 (6)0.0045 (6)
C70.0214 (8)0.0161 (8)0.0170 (7)−0.0011 (6)−0.0034 (6)0.0049 (6)
C80.0393 (11)0.0248 (10)0.0256 (9)−0.0047 (8)0.0090 (8)0.0024 (8)
C90.0487 (13)0.0307 (11)0.0298 (10)−0.0144 (10)0.0076 (9)0.0085 (8)
C100.0541 (14)0.0257 (10)0.0294 (10)−0.0187 (10)−0.0043 (10)0.0067 (8)
C110.0641 (16)0.0277 (11)0.0253 (10)−0.0162 (10)0.0042 (10)−0.0047 (8)
C120.0462 (12)0.0261 (10)0.0209 (9)−0.0108 (9)0.0075 (8)0.0013 (7)
C130.0239 (8)0.0179 (8)0.0212 (8)0.0076 (7)0.0003 (7)0.0056 (6)
C140.0314 (10)0.0230 (9)0.0362 (10)0.0145 (8)0.0110 (8)0.0083 (8)
C150.0155 (7)0.0190 (8)0.0227 (8)0.0042 (6)0.0041 (6)0.0052 (6)
C160.0164 (8)0.0166 (8)0.0262 (8)0.0020 (6)0.0045 (6)0.0066 (6)
C170.0293 (10)0.0198 (9)0.0539 (13)0.0035 (8)0.0218 (9)0.0127 (9)
C180.0183 (8)0.0149 (7)0.0176 (7)0.0033 (6)0.0026 (6)0.0045 (6)
C190.0184 (8)0.0161 (8)0.0256 (8)0.0051 (6)0.0042 (6)0.0043 (6)
C200.0269 (9)0.0202 (8)0.0267 (9)0.0087 (7)0.0084 (7)0.0082 (7)
C210.0252 (9)0.0227 (9)0.0339 (10)0.0067 (7)0.0112 (8)0.0088 (8)
C220.0223 (9)0.0245 (9)0.0370 (10)0.0095 (7)0.0090 (8)0.0054 (8)
C230.0228 (9)0.0195 (8)0.0395 (11)0.0076 (7)0.0047 (8)0.0099 (8)
C240.0227 (8)0.0155 (8)0.0316 (9)0.0039 (6)0.0059 (7)0.0086 (7)
Cl10.0259 (2)0.0181 (2)0.0311 (2)−0.00051 (16)0.00502 (17)0.00675 (16)
O10.0389 (11)0.0279 (9)0.0777 (15)0.0110 (8)0.0042 (10)0.0253 (9)
Ni1—N22.0332 (13)C5—H5B0.9800
Ni1—N62.0479 (14)C5—H5C0.9800
Ni1—N52.0967 (14)C7—C121.383 (3)
Ni1—N12.1076 (14)C7—C81.392 (3)
Ni1—S22.3619 (5)C8—C91.392 (3)
Ni1—S42.4139 (5)C8—H80.9500
S1—C21.7155 (19)C9—C101.391 (3)
S1—C31.7223 (16)C9—H90.9500
S2—C61.7317 (16)C10—C111.381 (3)
S3—C141.705 (2)C10—H100.9500
S3—C151.7121 (17)C11—C121.387 (3)
S4—C181.6837 (17)C11—H110.9500
N1—C31.321 (2)C12—H120.9500
N1—C11.372 (2)C13—C141.358 (3)
N2—C41.301 (2)C13—H130.9500
N2—N31.3703 (18)C14—H140.9500
N3—C61.331 (2)C15—C161.462 (2)
N4—C61.357 (2)C16—C171.495 (2)
N4—C71.413 (2)C17—H17A0.9800
N4—H4N0.80 (2)C17—H17B0.9800
N5—C151.322 (2)C17—H17C0.9800
N5—C131.376 (2)C19—C201.391 (2)
N6—C161.294 (2)C19—C241.400 (2)
N6—N71.3633 (19)C20—C211.383 (2)
N7—C181.372 (2)C20—H200.9500
N7—H7N0.82 (2)C21—C221.391 (3)
N8—C181.344 (2)C21—H210.9500
N8—C191.408 (2)C22—C231.388 (3)
N8—H8N0.89 (2)C22—H220.9500
C1—C21.362 (2)C23—C241.382 (2)
C1—H10.9500C23—H230.9500
C2—H20.9500C24—H240.9500
C3—C41.461 (2)O1—H010.837 (17)
C4—C51.492 (2)O1—H020.819 (17)
C5—H5A0.9800
N2—Ni1—N6176.08 (5)N3—C6—S2126.98 (12)
N2—Ni1—N598.26 (5)N4—C6—S2115.26 (11)
N6—Ni1—N577.83 (5)C12—C7—C8119.82 (17)
N2—Ni1—N178.96 (5)C12—C7—N4117.41 (15)
N6—Ni1—N1101.11 (5)C8—C7—N4122.49 (16)
N5—Ni1—N195.07 (5)C7—C8—C9119.35 (18)
N2—Ni1—S281.48 (4)C7—C8—H8120.3
N6—Ni1—S298.44 (4)C9—C8—H8120.3
N5—Ni1—S288.16 (4)C10—C9—C8120.67 (19)
N1—Ni1—S2160.44 (4)C10—C9—H9119.7
N2—Ni1—S4102.43 (4)C8—C9—H9119.7
N6—Ni1—S481.48 (4)C11—C10—C9119.44 (19)
N5—Ni1—S4159.14 (4)C11—C10—H10120.3
N1—Ni1—S491.49 (4)C9—C10—H10120.3
S2—Ni1—S492.252 (19)C10—C11—C12120.2 (2)
C2—S1—C389.79 (8)C10—C11—H11119.9
C6—S2—Ni195.09 (5)C12—C11—H11119.9
C14—S3—C1589.67 (9)C7—C12—C11120.49 (18)
C18—S4—Ni197.18 (6)C7—C12—H12119.8
C3—N1—C1111.36 (14)C11—C12—H12119.8
C3—N1—Ni1109.88 (11)C14—C13—N5114.44 (16)
C1—N1—Ni1138.41 (12)C14—C13—H13122.8
C4—N2—N3117.28 (13)N5—C13—H13122.8
C4—N2—Ni1117.92 (11)C13—C14—S3110.81 (14)
N3—N2—Ni1124.70 (10)C13—C14—H14124.6
C6—N3—N2111.60 (13)S3—C14—H14124.6
C6—N4—C7130.21 (14)N5—C15—C16120.30 (15)
C6—N4—H4N112.7 (15)N5—C15—S3114.19 (13)
C7—N4—H4N117.1 (15)C16—C15—S3125.19 (13)
C15—N5—C13110.87 (15)N6—C16—C15111.47 (15)
C15—N5—Ni1111.02 (11)N6—C16—C17125.99 (16)
C13—N5—Ni1136.07 (12)C15—C16—C17122.37 (15)
C16—N6—N7120.21 (14)C16—C17—H17A109.5
C16—N6—Ni1118.79 (11)C16—C17—H17B109.5
N7—N6—Ni1120.66 (11)H17A—C17—H17B109.5
N6—N7—C18118.32 (14)C16—C17—H17C109.5
N6—N7—H7N121.7 (15)H17A—C17—H17C109.5
C18—N7—H7N119.6 (15)H17B—C17—H17C109.5
C18—N8—C19130.77 (15)N8—C18—N7111.65 (14)
C18—N8—H8N113.2 (14)N8—C18—S4126.23 (13)
C19—N8—H8N115.9 (14)N7—C18—S4122.10 (12)
C2—C1—N1114.90 (16)C20—C19—C24119.69 (16)
C2—C1—H1122.5C20—C19—N8124.65 (15)
N1—C1—H1122.5C24—C19—N8115.51 (15)
C1—C2—S1110.19 (13)C21—C20—C19119.57 (16)
C1—C2—H2124.9C21—C20—H20120.2
S1—C2—H2124.9C19—C20—H20120.2
N1—C3—C4120.81 (14)C20—C21—C22120.99 (17)
N1—C3—S1113.76 (12)C20—C21—H21119.5
C4—C3—S1125.42 (12)C22—C21—H21119.5
N2—C4—C3112.28 (14)C23—C22—C21119.28 (17)
N2—C4—C5125.17 (15)C23—C22—H22120.4
C3—C4—C5122.55 (14)C21—C22—H22120.4
C4—C5—H5A109.5C24—C23—C22120.36 (17)
C4—C5—H5B109.5C24—C23—H23119.8
H5A—C5—H5B109.5C22—C23—H23119.8
C4—C5—H5C109.5C23—C24—C19120.11 (17)
H5A—C5—H5C109.5C23—C24—H24119.9
H5B—C5—H5C109.5C19—C24—H24119.9
N3—C6—N4117.75 (14)H01—O1—H0296 (2)
N6—Ni1—N1—C1−9.68 (18)C6—N4—C7—C8−41.3 (3)
N2—Ni1—N5—C13−12.01 (16)Ni1—N5—C15—C16−6.61 (19)
Ni1—N1—C3—C4−4.3 (2)Ni1—N6—C16—C154.66 (19)
Ni1—N2—C4—C3−2.43 (19)Ni1—N6—N7—C185.4 (2)
Ni1—N2—N3—C63.64 (18)N5—C15—C16—N61.6 (2)
N1—C3—C4—N24.6 (2)C19—N8—C18—S4−4.7 (3)
N2—N3—C6—S2−0.3 (2)N6—N7—C18—S4−6.0 (2)
C7—N4—C6—N3−3.9 (3)Ni1—S4—C18—N73.48 (14)
Ni1—S2—C6—N3−2.24 (15)C18—N8—C19—C20−23.1 (3)
D—H···AD—HH···AD···AD—H···A
N4—H4N···S2i0.80 (2)2.54 (2)3.2595 (15)150.7 (19)
N7—H7N···Cl10.82 (2)2.45 (2)3.2050 (15)153.9 (19)
N8—H8N···Cl10.89 (2)2.23 (2)3.1051 (16)168.5 (19)
O1—H01···Cl1ii0.84 (2)2.33 (2)3.1653 (19)178 (3)
O1—H02···N30.82 (2)2.40 (2)3.112 (2)146 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H4N⋯S2i0.80 (2)2.54 (2)3.2595 (15)150.7 (19)
N7—H7N⋯Cl10.82 (2)2.45 (2)3.2050 (15)153.9 (19)
N8—H8N⋯Cl10.89 (2)2.23 (2)3.1051 (16)168.5 (19)
O1—H01⋯Cl1ii0.84 (2)2.33 (2)3.1653 (19)178 (3)
O1—H02⋯N30.82 (2)2.40 (2)3.112 (2)146 (3)

Symmetry codes: (i) ; (ii) .

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