Literature DB >> 20484991

NAC genes: time-specific regulators of hormonal signaling in Arabidopsis.

Michael Krogh Jensen1, Trine Kjaersgaard, Klaus Petersen, Karen Skriver.   

Abstract

Environmental stresses on both animals and plants impose massive transcriptional perturbations. Successful adaptations to such stresses are being orchestrated by both activating and repressing effects of transcription factors on specific target genes. We have recently published a systematic characterization of members of the large NAC gene transcription factor family in the model weed Arabidopsis thaliana. Our analysis revealed interesting sub-groupings of the Arabidopsis NAC genes, relating structure and function. Here we present a meta-analysis revealing distinct temporal expression profiles of NAC genes upon stimuli with seven phytohormones. Our analysis could be a first indication of NAC-centered transcriptional networks, which coordinate timely hormonal signaling in plants.

Entities:  

Keywords:  Arabidopsis; NAC genes; hormonal signaling; network; transcription factor

Year:  2010        PMID: 20484991      PMCID: PMC3014545          DOI: 10.4161/psb.5.7.12099

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  26 in total

1.  Preprocessing of oligonucleotide array data.

Authors:  Zhijin Wu; Rafael A Irizarry
Journal:  Nat Biotechnol       Date:  2004-06       Impact factor: 54.908

2.  Transcript profiling of transcription factor genes during silique development in Arabidopsis.

Authors:  Stefan de Folter; Jacqueline Busscher; Lucia Colombo; Alessia Losa; Gerco C Angenent
Journal:  Plant Mol Biol       Date:  2004-10       Impact factor: 4.076

3.  A gene expression map of Arabidopsis thaliana development.

Authors:  Markus Schmid; Timothy S Davison; Stefan R Henz; Utz J Pape; Monika Demar; Martin Vingron; Bernhard Schölkopf; Detlef Weigel; Jan U Lohmann
Journal:  Nat Genet       Date:  2005-04-03       Impact factor: 38.330

4.  Arabidopsis Aux/IAA genes are involved in brassinosteroid-mediated growth responses in a manner dependent on organ type.

Authors:  Ayako Nakamura; Naoko Nakajima; Hideki Goda; Yukihisa Shimada; Ken-Ichiro Hayashi; Hiroshi Nozaki; Tadao Asami; Shigeo Yoshida; Shozo Fujioka
Journal:  Plant J       Date:  2006-01       Impact factor: 6.417

5.  The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access.

Authors:  Hideki Goda; Eriko Sasaki; Kenji Akiyama; Akiko Maruyama-Nakashita; Kazumi Nakabayashi; Weiqiang Li; Mikihiro Ogawa; Yukika Yamauchi; Jeremy Preston; Ko Aoki; Takatoshi Kiba; Suguru Takatsuto; Shozo Fujioka; Tadao Asami; Takeshi Nakano; Hisashi Kato; Takeshi Mizuno; Hitoshi Sakakibara; Shinjiro Yamaguchi; Eiji Nambara; Yuji Kamiya; Hideki Takahashi; Masami Yokota Hirai; Tetsuya Sakurai; Kazuo Shinozaki; Kazuki Saito; Shigeo Yoshida; Yukihisa Shimada
Journal:  Plant J       Date:  2008-08       Impact factor: 6.417

6.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

7.  Gene expression analyses for elucidating mechanisms of hormonal action in plants.

Authors:  George W Bassel; Nicholas J Provart
Journal:  Methods Mol Biol       Date:  2009

8.  A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway.

Authors:  Miki Fujita; Yasunari Fujita; Kyonoshin Maruyama; Motoaki Seki; Keiichiro Hiratsu; Masaru Ohme-Takagi; Lam-Son Phan Tran; Kazuko Yamaguchi-Shinozaki; Kazuo Shinozaki
Journal:  Plant J       Date:  2004-09       Impact factor: 6.417

9.  Bioconductor: open software development for computational biology and bioinformatics.

Authors:  Robert C Gentleman; Vincent J Carey; Douglas M Bates; Ben Bolstad; Marcel Dettling; Sandrine Dudoit; Byron Ellis; Laurent Gautier; Yongchao Ge; Jeff Gentry; Kurt Hornik; Torsten Hothorn; Wolfgang Huber; Stefano Iacus; Rafael Irizarry; Friedrich Leisch; Cheng Li; Martin Maechler; Anthony J Rossini; Gunther Sawitzki; Colin Smith; Gordon Smyth; Luke Tierney; Jean Y H Yang; Jianhua Zhang
Journal:  Genome Biol       Date:  2004-09-15       Impact factor: 13.583

10.  Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays.

Authors:  Georg Zeller; Stefan R Henz; Christian K Widmer; Timo Sachsenberg; Gunnar Rätsch; Detlef Weigel; Sascha Laubinger
Journal:  Plant J       Date:  2009-02-13       Impact factor: 6.417

View more
  17 in total

1.  Genome-wide analysis, expression dynamics and varietal comparison of NAC gene family at various developmental stages in Morus notabilis.

Authors:  Vinay Kumar Baranwal; Paramjit Khurana
Journal:  Mol Genet Genomics       Date:  2016-03-04       Impact factor: 3.291

2.  Evaluation of the diversity and phylogenetic implications of NAC transcription factor members of four reference species from the different embryophytic plant groups.

Authors:  Rakhi Chakraborty; Swarnendu Roy
Journal:  Physiol Mol Biol Plants       Date:  2018-07-25

Review 3.  Emerging roles of NAC transcription factor in medicinal plants: progress and prospects.

Authors:  Ramesh Kumar; Shantanu Das; Madhvi Mishra; Debjani Roy Choudhury; Komal Sharma; Abha Kumari; Rakesh Singh
Journal:  3 Biotech       Date:  2021-09-04       Impact factor: 2.893

4.  An NAC transcription factor controls ethylene-regulated cell expansion in flower petals.

Authors:  Haixia Pei; Nan Ma; Ji Tian; Jing Luo; Jiwei Chen; Jing Li; Yi Zheng; Xiang Chen; Zhangjun Fei; Junping Gao
Journal:  Plant Physiol       Date:  2013-08-09       Impact factor: 8.340

Review 5.  The NAC side of the fruit: tuning of fruit development and maturation.

Authors:  Sara Forlani; Chiara Mizzotti; Simona Masiero
Journal:  BMC Plant Biol       Date:  2021-05-27       Impact factor: 4.215

6.  The pip1s Quintuple Mutants Demonstrate the Essential Roles of PIP1s in the Plant Growth and Development of Arabidopsis.

Authors:  Xing Wang; Yu Wu; Zijin Liu; Tong Liu; Lamei Zheng; Genfa Zhang
Journal:  Int J Mol Sci       Date:  2021-02-07       Impact factor: 5.923

Review 7.  Fairy "tails": flexibility and function of intrinsically disordered extensions in the photosynthetic world.

Authors:  Gabriel Thieulin-Pardo; Luisana Avilan; Mila Kojadinovic; Brigitte Gontero
Journal:  Front Mol Biosci       Date:  2015-05-19

8.  Overexpression of AtLOV1 in Switchgrass alters plant architecture, lignin content, and flowering time.

Authors:  Bin Xu; Noppadon Sathitsuksanoh; Yuhong Tang; Michael K Udvardi; Ji-Yi Zhang; Zhengxing Shen; Maria Balota; Kim Harich; Percival Y-H Zhang; Bingyu Zhao
Journal:  PLoS One       Date:  2012-12-26       Impact factor: 3.240

9.  Molecular Characterization and Expression Profiling of NAC Transcription Factors in Brachypodium distachyon L.

Authors:  Gengrui Zhu; Guanxing Chen; Jiantang Zhu; Yan Zhu; Xiaobing Lu; Xiaohui Li; Yingkao Hu; Yueming Yan
Journal:  PLoS One       Date:  2015-10-07       Impact factor: 3.240

10.  Genome-wide digital transcript analysis of putative fruitlet abscission related genes regulated by ethephon in litchi.

Authors:  Caiqin Li; Yan Wang; Peiyuan Ying; Wuqiang Ma; Jianguo Li
Journal:  Front Plant Sci       Date:  2015-07-07       Impact factor: 5.753

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.