Literature DB >> 20484609

Development of microsphere-based multiplex branched DNA assay for detection and differentiation of avian influenza virus strains.

Wonhee Cha1, Yunqing Ma, Yehia Mo Saif, Chang-Won Lee.   

Abstract

We developed and evaluated a multiplex branched DNA assay for the detection and subtyping of avian influenza (AI) virus strains. The assay successfully detected all 94 AI virus strains of 15 different hemagglutinin (HA) subtypes tested while simultaneously differentiating 24 North American H5, 11 Eurasian H5, and 11 H7 strains. Our study demonstrates for the first time that a branched DNA method can detect targets that show a great amount of sequence variation.

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Year:  2010        PMID： 20484609      PMCID： PMC2897486          DOI： 10.1128/JCM.01979-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  13 in total

1.  ProbeDesigner: for the design of probesets for branched DNA (bDNA) signal amplification assays.

Authors:  S Bushnell; J Budde; T Catino; J Cole; A Derti; R Kelso; M L Collins; G Molino; P Sheridan; J Monahan; M Urdea
Journal:  Bioinformatics       Date:  1999-05       Impact factor: 6.937

Review 2.  Multiplexed particle-based flow cytometric assays.

Authors:  D A Vignali
Journal:  J Immunol Methods       Date:  2000-09-21       Impact factor: 2.303

3.  A multiplex branched DNA assay for parallel quantitative gene expression profiling.

Authors:  Michael Flagella; Son Bui; Zhi Zheng; Cung Tuong Nguyen; Aiguo Zhang; Larry Pastor; Yunqing Ma; Wen Yang; Kimberly L Crawford; Gary K McMaster; Frank Witney; Yuling Luo
Journal:  Anal Biochem       Date:  2006-03-02       Impact factor: 3.365

4.  Type A influenza virus detection and quantitation by real-time RT-PCR.

Authors:  Erica Spackman; David L Suarez
Journal:  Methods Mol Biol       Date:  2008

5.  Branched DNA signal amplification.

Authors:  M S Urdea
Journal:  Biotechnology (N Y)       Date:  1994-09

6.  Pandemic influenza: a zoonosis?

Authors:  K F Shortridge
Journal:  Semin Respir Infect       Date:  1992-03

7.  Small interfering RNA and gene expression analysis using a multiplex branched DNA assay without RNA purification.

Authors:  Aiguo Zhang; Larry Pastor; Quan Nguyen; Yuling Luo; Wen Yang; Michael Flagella; Rajesh Chavli; Son Bui; Cung Tuong Nguyen; Zhi Zheng; Weihai He; Gary McMaster; Frank Witney
Journal:  J Biomol Screen       Date:  2005-08-15

8.  Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes.

Authors:  Erica Spackman; Dennis A Senne; T J Myers; Leslie L Bulaga; Lindsey P Garber; Michael L Perdue; Kenton Lohman; Luke T Daum; David L Suarez
Journal:  J Clin Microbiol       Date:  2002-09       Impact factor: 5.948

9.  Significance of serum hepatitis C virus RNA levels in chronic hepatitis C.

Authors:  J Y Lau; G L Davis; J Kniffen; K P Qian; M S Urdea; C S Chan; M Mizokami; P D Neuwald; J C Wilber
Journal:  Lancet       Date:  1993-06-12       Impact factor: 79.321

10.  Application of real-time RT-PCR for the quantitation and competitive replication study of H5 and H7 subtype avian influenza virus.

Authors:  Chang-Won Lee; David L Suarez
Journal:  J Virol Methods       Date:  2004-08       Impact factor: 2.014
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  1 in total

1.  Microsphere-based multiplex analysis of DNA methylation in acute myeloid leukemia.

Authors:  Gerald B W Wertheim; Catherine Smith; Maria E Figueroa; Michael Kalos; Adam Bagg; Martin Carroll; Stephen R Master
Journal:  J Mol Diagn       Date:  2013-12-25       Impact factor: 5.568
  1 in total

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