Literature DB >> 20483229

Comparative genomics of medaka and fugu.

Nobuyoshi Shimizu1, Takashi Sasaki, Shuichi Asakawa, Atsushi Shimizu, Sabine K Ishikawa, Shuichiro Imai, Yuji Murayama, Heinz Himmelbauer, Hiroshi Mitani, Makoto Furutani-Seiki, Hisato Kondoh, Manfred Schartl, Masaru Nonaka, Hiroyuki Takeda, Hiroshi Hori, Akihiro Shima.   

Abstract

A small freshwater fish medaka (Oryzias latipes) has been one of the most attractive experimental systems for research in genetics and developmental biology. We have formed an international consortium Medaka Genome Initiative (MGI) to collect and share various information and resources on medaka. The MGI has set an ambitious goal aiming at the complete sequencing of the medaka genome and as a feasibility study we have begun sequencing one particular chromosome, linkage group 22 (LG22) of approximately 22 Mb in size. Initial sequence analysis revealed unique features of the medaka genome in comparison to fugu genome.

Entities:  

Year:  2006        PMID: 20483229     DOI: 10.1016/j.cbd.2005.10.008

Source DB:  PubMed          Journal:  Comp Biochem Physiol Part D Genomics Proteomics        ISSN: 1744-117X            Impact factor:   2.674


  3 in total

1.  A gene-based radiation hybrid map of the gilthead sea bream Sparus aurata refines and exploits conserved synteny with Tetraodon nigroviridis.

Authors:  Elena Sarropoulou; Rafaella Franch; Bruno Louro; Deborah M Power; Luca Bargelloni; Antonios Magoulas; Fabrice Senger; Matina Tsalavouta; Tomaso Patarnello; Francis Galibert; Georgios Kotoulas; Robert Geisler
Journal:  BMC Genomics       Date:  2007-02-07       Impact factor: 3.969

2.  ESTs and EST-linked polymorphisms for genetic mapping and phylogenetic reconstruction in the guppy, Poecilia reticulata.

Authors:  Christine Dreyer; Margarete Hoffmann; Christa Lanz; Eva-Maria Willing; Markus Riester; Norman Warthmann; Andrea Sprecher; Namita Tripathi; Stefan R Henz; Detlef Weigel
Journal:  BMC Genomics       Date:  2007-08-08       Impact factor: 3.969

3.  Genetic linkage map of olive flounder, Paralichthys olivaceus.

Authors:  Jung-Ha Kang; Woo-Jin Kim; Woo-Jai Lee
Journal:  Int J Biol Sci       Date:  2008-05-10       Impact factor: 6.580

  3 in total

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