Literature DB >> 20482319

Converging on the function of intrinsically disordered nucleoporins in the nuclear pore complex.

Orit Peleg1, Roderick Y H Lim.   

Abstract

Several biological mechanisms involve proteins or proteinaceous components that are intrinsically disordered. A case in point pertains to the nuclear pore complex (NPC), which regulates molecular transport between the nucleus and the cytoplasm. NPC functionality is dependent on unfolded domains rich in Phe-Gly (FG) repeats (i.e., FG-domains) that collectively act to promote or hinder cargo translocation. To a large extent, our understanding of FG-domain behavior is limited to in vitro investigations given the difficulty to resolve them directly in the NPC. Nevertheless, recent findings indicate a collective convergence towards rationalizing FG-domain function. This review aims to glean further insight into this fascinating problem by taking an objective look at the boundary conditions and contextual details underpinning FG-domain behavior in the NPC. Here, we treat the FG-domains as being commensurate with polymeric chains to address ambiguities such as for instance, how FG-domains tethered to the central channel of the NPC would behave differently as compared with their free-floating counterparts in solution. By bringing such fundamental questions to the fore, this review seeks to illuminate the importance of how such parameters can hold influence over the structure-function relation of intrinsically disordered proteins in the NPC and beyond.

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Year:  2010        PMID: 20482319     DOI: 10.1515/BC.2010.092

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  22 in total

1.  Nucleocytoplasmic transport: a role for nonspecific competition in karyopherin-nucleoporin interactions.

Authors:  Jaclyn Tetenbaum-Novatt; Loren E Hough; Roxana Mironska; Anna Sophia McKenney; Michael P Rout
Journal:  Mol Cell Proteomics       Date:  2012-02-22       Impact factor: 5.911

Review 2.  How to operate a nuclear pore complex by Kap-centric control.

Authors:  Roderick Y H Lim; Binlu Huang; Larisa E Kapinos
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

3.  Large cargo transport by nuclear pores: implications for the spatial organization of FG-nucleoporins.

Authors:  Li-Chun Tu; Guo Fu; Anton Zilman; Siegfried M Musser
Journal:  EMBO J       Date:  2013-11-08       Impact factor: 11.598

4.  The transmembrane nucleoporin Pom121 ensures efficient HIV-1 pre-integration complex nuclear import.

Authors:  Jing Guo; Xianxian Liu; Chuanjian Wu; Jingping Hu; Ke Peng; Li Wu; Sidong Xiong; Chunsheng Dong
Journal:  Virology       Date:  2018-06-25       Impact factor: 3.616

5.  Liquid-based gating mechanism with tunable multiphase selectivity and antifouling behaviour.

Authors:  Xu Hou; Yuhang Hu; Alison Grinthal; Mughees Khan; Joanna Aizenberg
Journal:  Nature       Date:  2015-03-05       Impact factor: 49.962

6.  Nuclear transport receptor binding avidity triggers a self-healing collapse transition in FG-nucleoporin molecular brushes.

Authors:  Rafael L Schoch; Larisa E Kapinos; Roderick Y H Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-04       Impact factor: 11.205

7.  Effect of charge, hydrophobicity, and sequence of nucleoporins on the translocation of model particles through the nuclear pore complex.

Authors:  Mario Tagliazucchi; Orit Peleg; Martin Kröger; Yitzhak Rabin; Igal Szleifer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-12       Impact factor: 11.205

8.  Karyopherin-centric control of nuclear pores based on molecular occupancy and kinetic analysis of multivalent binding with FG nucleoporins.

Authors:  Larisa E Kapinos; Rafael L Schoch; Raphael S Wagner; Kai D Schleicher; Roderick Y H Lim
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

Review 9.  The selective permeability barrier in the nuclear pore complex.

Authors:  Christina Li; Alexander Goryaynov; Weidong Yang
Journal:  Nucleus       Date:  2016-09-27       Impact factor: 4.197

10.  Effect of Grafting on Aggregation of Intrinsically Disordered Proteins.

Authors:  Dino Osmanovic; Yitzhak Rabin
Journal:  Biophys J       Date:  2018-01-31       Impact factor: 4.033

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