Literature DB >> 20481499

What factors influence the rate constant of substrate epoxidation by compound I of cytochrome P450 and analogous iron(IV)-oxo oxidants?

Devesh Kumar1, Baharan Karamzadeh, G Narahari Sastry, Sam P de Visser.   

Abstract

The cytochromes P450 are a versatile range of mono-oxygenase enzymes that catalyze a variety of different chemical reactions, of which the key reactions include aliphatic hydroxylation and C=C double bond epoxidation. To establish the fundamental factors that govern substrate epoxidation by these enzymes we have done a systematic density functional theory study on substrate epoxidation by the active species of P450 enzymes, namely the iron(IV)-oxo porphyrin cation radical oxidant or Compound I. We show here, for the first time, that the rate constant of substrate epoxidation, and hence the activation energy, correlates with the ionization potential of the substrate as well as with intrinsic electronic properties of the active oxidant such as the polarizability volume. To explain these findings we present an electron-transfer model for the reaction mechanism that explains the factors that determine the barrier heights and developed a valence bond (VB) curve crossing mechanism to rationalize the observed trends. In addition, we have found a correlation for substrate epoxidation reactions catalyzed by a range of heme and nonheme iron(IV)-oxo oxidants with the strength of the O-H bond in the iron-hydroxo complex, i.e. BDE(OH), which is supported by the VB model. Finally, the fundamental factors that determine the regioselectivity change between substrate hydroxylation and epoxidation are discussed. It is shown that the regioselectivity of aliphatic hydroxylation versus double bond epoxidation is not influenced by the choice of the oxidant but is purely substrate dependent.

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Year:  2010        PMID: 20481499     DOI: 10.1021/ja9106176

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

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Authors:  Leland R Widger; Yunbo Jiang; Maxime A Siegler; Devesh Kumar; Reza Latifi; Sam P de Visser; Guy N L Jameson; David P Goldberg
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2.  The oxidation of cyclo-olefin by the S = 2 ground-state complex [FeIV(O)(TQA)(NCMe)]2.

Authors:  Zixian Li; Yi Wang; Wenzhi Li; Qingyue Li; Fan Li; Ziqing Gao; Xu Fei; Jing Tian; Liang Dong
Journal:  J Biol Inorg Chem       Date:  2020-03-04       Impact factor: 3.358

3.  Epoxidation Catalyzed by the Nonheme Iron(II)- and 2-Oxoglutarate-Dependent Oxygenase, AsqJ: Mechanistic Elucidation of Oxygen Atom Transfer by a Ferryl Intermediate.

Authors:  Jikun Li; Hsuan-Jen Liao; Yijie Tang; Jhih-Liang Huang; Lide Cha; Te-Sheng Lin; Justin L Lee; Igor V Kurnikov; Maria G Kurnikova; Wei-Chen Chang; Nei-Li Chan; Yisong Guo
Journal:  J Am Chem Soc       Date:  2020-03-16       Impact factor: 15.419

4.  Chloroperoxidase-catalyzed epoxidation of cis-β-methylstyrene: distal pocket flexibility tunes catalytic reactivity.

Authors:  Alexander N Morozov; David C Chatfield
Journal:  J Phys Chem B       Date:  2012-10-19       Impact factor: 2.991

Review 5.  Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins.

Authors:  Xiongyi Huang; John T Groves
Journal:  Chem Rev       Date:  2017-12-29       Impact factor: 60.622

6.  Hydrogen Atom Abstraction by High-Valent Fe(OH) versus Mn(OH) Porphyrinoid Complexes: Mechanistic Insights from Experimental and Computational Studies.

Authors:  Jan Paulo T Zaragoza; Daniel C Cummins; M Qadri E Mubarak; Maxime A Siegler; Sam P de Visser; David P Goldberg
Journal:  Inorg Chem       Date:  2019-12-05       Impact factor: 5.165

7.  Axial and equatorial ligand effects on biomimetic cysteine dioxygenase model complexes.

Authors:  Luis E Gonzalez-Ovalle; Matthew G Quesne; Devesh Kumar; David P Goldberg; Sam P de Visser
Journal:  Org Biomol Chem       Date:  2012-06-19       Impact factor: 3.876

8.  Arene activation by a nonheme iron(III)-hydroperoxo complex: pathways leading to phenol and ketone products.

Authors:  Abayomi S Faponle; Frédéric Banse; Sam P de Visser
Journal:  J Biol Inorg Chem       Date:  2016-04-20       Impact factor: 3.358

9.  Singlet versus Triplet Reactivity in an Mn(V)-Oxo Species: Testing Theoretical Predictions Against Experimental Evidence.

Authors:  Tzuhsiung Yang; Matthew G Quesne; Heather M Neu; Fabián G Cantú Reinhard; David P Goldberg; Sam P de Visser
Journal:  J Am Chem Soc       Date:  2016-09-14       Impact factor: 15.419

10.  Biomimetic Reactivity of Oxygen-Derived Manganese and Iron Porphyrinoid Complexes.

Authors:  Regina A Baglia; Jan Paulo T Zaragoza; David P Goldberg
Journal:  Chem Rev       Date:  2017-10-09       Impact factor: 60.622

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