Literature DB >> 20467122

Efficient curve-skeleton computation for the analysis of biomedical 3d images - biomed 2010.

Francesco Brun1, Diego Dreossi.   

Abstract

Advances in three dimensional (3D) biomedical imaging techniques, such as magnetic resonance (MR) and computed tomography (CT), make it easy to reconstruct high quality 3D models of portions of human body and other biological specimens. A major challenge lies in the quantitative analysis of the resulting models thus allowing a more comprehensive characterization of the object under investigation. An interesting approach is based on curve-skeleton (or medial axis) extraction, which gives basic information concerning the topology and the geometry. Curve-skeletons have been applied in the analysis of vascular networks and the diagnosis of tracheal stenoses as well as a 3D flight path in virtual endoscopy. However curve-skeleton computation is a crucial task. An effective skeletonization algorithm was introduced by N. Cornea in [1] but it lacks in computational performances. Thanks to the advances in imaging techniques the resolution of 3D images is increasing more and more, therefore there is the need for efficient algorithms in order to analyze significant Volumes of Interest (VOIs). In the present paper an improved skeletonization algorithm based on the idea proposed in [1] is presented. A computational comparison between the original and the proposed method is also reported. The obtained results show that the proposed method allows a significant computational improvement making more appealing the adoption of the skeleton representation in biomedical image analysis applications.

Entities:  

Year:  2010        PMID: 20467122

Source DB:  PubMed          Journal:  Biomed Sci Instrum        ISSN: 0067-8856


  4 in total

1.  Automated quantitative characterization of alginate/hydroxyapatite bone tissue engineering scaffolds by means of micro-CT image analysis.

Authors:  Francesco Brun; Gianluca Turco; Agostino Accardo; Sergio Paoletti
Journal:  J Mater Sci Mater Med       Date:  2011-09-18       Impact factor: 3.896

2.  A four-dimensional X-ray tomographic microscopy study of bubble growth in basaltic foam.

Authors:  Don R Baker; Francesco Brun; Cedrick O'Shaughnessy; Lucia Mancini; Julie L Fife; Mark Rivers
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

3.  Dataset of ptychographic X-ray computed tomography of inverse opal photonic crystals produced by atomic layer deposition.

Authors:  Kaline P Furlan; Emanuel Larsson; Ana Diaz; Mirko Holler; Tobias Krekeler; Martin Ritter; Alexander Yu Petrov; Manfred Eich; Robert Blick; Gerold A Schneider; Imke Greving; Robert Zierold; Rolf Janßen
Journal:  Data Brief       Date:  2018-10-27

4.  Hierarchical supercrystalline nanocomposites through the self-assembly of organically-modified ceramic nanoparticles.

Authors:  Berta Domènech; Michael Kampferbeck; Emanuel Larsson; Tobias Krekeler; Büsra Bor; Diletta Giuntini; Malte Blankenburg; Martin Ritter; Martin Müller; Tobias Vossmeyer; Horst Weller; Gerold A Schneider
Journal:  Sci Rep       Date:  2019-03-05       Impact factor: 4.379

  4 in total

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