Literature DB >> 20465995

Development of a high-resolution melting method for the screening of Wilson disease-related ATP7B gene mutations.

Chin-Wen Lin1, Tze-Kiong Er, Fu-Jen Tsai, Ta-Chi Liu, Pang-Yin Shin, Jan-Gowth Chang.   

Abstract

BACKGROUND: Wilson disease is an autosomal recessive inherited disorder of copper metabolism. The condition is characterized by excessive deposition of copper in many organs and tissues. The major physiologic aberration is excessive absorption of copper from the small intestine and impaired biliary copper excretion. The genetic defect is located at copper-transporting adenosine triphosphatase (ATPase) gene (ATP7B).
METHODS: A high-resolution melting analysis (HRM) was designed to characterize the ATP7B hotspot mutations. Genomic DNA was extracted from peripheral blood samples from 14 patients and 50 normal controls. The 21 exons of ATP7B were screened by HRM analysis. Our methodology was confirmed by direct DNA sequencing.
RESULTS: We have confirmed the 10 different hotspot mutations and 7 polymorphisms in the ATP7B gene, and also identified 1 newly-identified sequence variant (p.A476T) and 1 novel SNP (p.L776L) in 50 normal Taiwanese individuals. We estimate that the carrier frequency of WD in the Taiwanese population as probably 0.03.
CONCLUSIONS: HRM analysis is accepted as a rapid, accurate and low-cost method to screen ATP7B gene mutations. Copyright 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20465995     DOI: 10.1016/j.cca.2010.04.030

Source DB:  PubMed          Journal:  Clin Chim Acta        ISSN: 0009-8981            Impact factor:   3.786


  6 in total

1.  Enhanced primer selection and synthetic amplicon templates optimize high-resolution melting analysis of single-nucleotide polymorphisms in a large population.

Authors:  Carol M Bruzzone; Patrick S Tawadros; Lisa A Boardman; Clifford J Steer
Journal:  Genet Test Mol Biomarkers       Date:  2013-06-22

2.  High resolution melting analysis for a rapid identification of heterozygous and homozygous sequence changes in the MUTYH gene.

Authors:  Rossella Tricarico; Francesca Crucianelli; Antonio Alvau; Claudio Orlando; Roberta Sestini; Francesco Tonelli; Rosa Valanzano; Maurizio Genuardi
Journal:  BMC Cancer       Date:  2011-07-21       Impact factor: 4.430

Review 3.  Inherited copper transport disorders: biochemical mechanisms, diagnosis, and treatment.

Authors:  Hiroko Kodama; Chie Fujisawa; Wattanaporn Bhadhprasit
Journal:  Curr Drug Metab       Date:  2012-03       Impact factor: 3.731

4.  Assessment of high resolution melt analysis feasibility for evaluation of beta-globin gene mutations as a reproducible, cost-efficient and fast alternative to the present conventional method.

Authors:  Mahboubeh Ramezanzadeh; Mansour Salehi; Rasoul Salehi
Journal:  Adv Biomed Res       Date:  2016-04-19

Review 5.  The six metal binding domains in human copper transporter, ATP7B: molecular biophysics and disease-causing mutations.

Authors:  Candan Ariöz; Yaozong Li; Pernilla Wittung-Stafshede
Journal:  Biometals       Date:  2017-10-23       Impact factor: 2.949

6.  High-resolution melting analysis reveals genetic polymorphisms in microRNAs confer hepatocellular carcinoma risk in Chinese patients.

Authors:  Jia-Hui Qi; Jin Wang; Jinyun Chen; Fan Shen; Jing-Tao Huang; Subrata Sen; Xin Zhou; Song-Mei Liu
Journal:  BMC Cancer       Date:  2014-08-31       Impact factor: 4.430

  6 in total

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