Literature DB >> 20463762

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans.

Rex R Malmstrom1, Allison Coe, Gregory C Kettler, Adam C Martiny, Jorge Frias-Lopez, Erik R Zinser, Sallie W Chisholm.   

Abstract

To better understand the temporal and spatial dynamics of Prochlorococcus populations, and how these populations co-vary with the physical environment, we followed monthly changes in the abundance of five ecotypes-two high-light adapted and three low-light adapted-over a 5-year period in coordination with the Bermuda Atlantic Time Series (BATS) and Hawaii Ocean Time-series (HOT) programs. Ecotype abundance displayed weak seasonal fluctuations at HOT and strong seasonal fluctuations at BATS. Furthermore, stable 'layered' depth distributions, where different Prochlorococcus ecotypes reached maximum abundance at different depths, were maintained consistently for 5 years at HOT. Layered distributions were also observed at BATS, although winter deep mixing events disrupted these patterns each year and produced large variations in ecotype abundance. Interestingly, the layered ecotype distributions were regularly reestablished each year after deep mixing subsided at BATS. In addition, Prochlorococcus ecotypes each responded differently to the strong seasonal changes in light, temperature and mixing at BATS, resulting in a reproducible annual succession of ecotype blooms. Patterns of ecotype abundance, in combination with physiological assays of cultured isolates, confirmed that the low-light adapted eNATL could be distinguished from other low-light adapted ecotypes based on its ability to withstand temporary exposure to high-intensity light, a characteristic stress of the surface mixed layer. Finally, total Prochlorococcus and Synechococcus dynamics were compared with similar time series data collected a decade earlier at each location. The two data sets were remarkably similar-testimony to the resilience of these complex dynamic systems on decadal time scales.

Mesh:

Year:  2010        PMID: 20463762     DOI: 10.1038/ismej.2010.60

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  69 in total

1.  Novel lineages of Prochlorococcus and Synechococcus in the global oceans.

Authors:  Sijun Huang; Steven W Wilhelm; H Rodger Harvey; Karen Taylor; Nianzhi Jiao; Feng Chen
Journal:  ISME J       Date:  2011-09-29       Impact factor: 10.302

2.  Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean.

Authors:  Yanmei Shi; Gene W Tyson; John M Eppley; Edward F DeLong
Journal:  ISME J       Date:  2010-12-09       Impact factor: 10.302

3.  Ecosystem-specific selection pressures revealed through comparative population genomics.

Authors:  Maureen L Coleman; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-11       Impact factor: 11.205

4.  Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific.

Authors:  Alyse A Larkin; Sara K Blinebry; Caroline Howes; Yajuan Lin; Sarah E Loftus; Carrie A Schmaus; Erik R Zinser; Zackary I Johnson
Journal:  ISME J       Date:  2016-01-22       Impact factor: 10.302

5.  Evolutionary radiation of lanthipeptides in marine cyanobacteria.

Authors:  Andres Cubillos-Ruiz; Jessie W Berta-Thompson; Jamie W Becker; Wilfred A van der Donk; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

6.  Determining indicator taxa across spatial and seasonal gradients in the Columbia River coastal margin.

Authors:  Caroline S Fortunato; Alexander Eiler; Lydie Herfort; Joseph A Needoba; Tawnya D Peterson; Byron C Crump
Journal:  ISME J       Date:  2013-05-30       Impact factor: 10.302

7.  Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight.

Authors:  Cheryl-Emiliane T Chow; Rohan Sachdeva; Jacob A Cram; Joshua A Steele; David M Needham; Anand Patel; Alma E Parada; Jed A Fuhrman
Journal:  ISME J       Date:  2013-07-18       Impact factor: 10.302

8.  Development and bias assessment of a method for targeted metagenomic sequencing of marine cyanobacteria.

Authors:  Cécilia S Batmalle; Hsin-I Chiang; Kun Zhang; Michael W Lomas; Adam C Martiny
Journal:  Appl Environ Microbiol       Date:  2013-12-02       Impact factor: 4.792

9.  Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists.

Authors:  Cheryl-Emiliane T Chow; Diane Y Kim; Rohan Sachdeva; David A Caron; Jed A Fuhrman
Journal:  ISME J       Date:  2013-11-07       Impact factor: 10.302

10.  Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis.

Authors:  Rex R Malmstrom; Sébastien Rodrigue; Katherine H Huang; Libusha Kelly; Suzanne E Kern; Anne Thompson; Sara Roggensack; Paul M Berube; Matthew R Henn; Sallie W Chisholm
Journal:  ISME J       Date:  2012-08-16       Impact factor: 10.302

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