Literature DB >> 20461597

Towards prediction of HCV therapy efficiency.

Szymon Wasik1, Paulina Jackowiak, Jacek B Krawczyk, Paweł Kedziora, Piotr Formanowicz, Marek Figlerowicz, Jacek Błazewicz.   

Abstract

We investigate a correlation between genetic diversity of hepatitis C virus population and the level of viral RNA accumulation in patient blood. Genetic diversity is defined as the mean Hamming distance between all pairs of virus RNA sequences representing the population. We have found that a low Hamming distance (i.e. low genetic diversity) correlates with a high RNA level; symmetrically, high diversity corresponds to a low RNA level. We contend that the obtained correlation strength justifies the use of the viral RNA level as a measure enabling prediction of efficiency of an established therapy. We also propose that patient qualification for therapy, based on viral RNA level, improves its efficiency.

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Year:  2010        PMID: 20461597     DOI: 10.1080/17486700903170712

Source DB:  PubMed          Journal:  Comput Math Methods Med        ISSN: 1748-670X            Impact factor:   2.238


  4 in total

1.  Bioinformatics and computational biology in Poland.

Authors:  Janusz M Bujnicki; Jerzy Tiuryn
Journal:  PLoS Comput Biol       Date:  2013-05-02       Impact factor: 4.475

2.  ModeLang: a new approach for experts-friendly viral infections modeling.

Authors:  Szymon Wasik; Tomasz Prejzendanc; Jacek Blazewicz
Journal:  Comput Math Methods Med       Date:  2013-12-18       Impact factor: 2.238

3.  Hypercycle.

Authors:  Natalia Szostak; Szymon Wasik; Jacek Blazewicz
Journal:  PLoS Comput Biol       Date:  2016-04-07       Impact factor: 4.475

4.  Simulating the origins of life: The dual role of RNA replicases as an obstacle to evolution.

Authors:  Natalia Szostak; Jaroslaw Synak; Marcin Borowski; Szymon Wasik; Jacek Blazewicz
Journal:  PLoS One       Date:  2017-07-10       Impact factor: 3.240

  4 in total

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