Literature DB >> 20459171

Properties of liquid water from a systematic refinement of a high-rank multipolar electrostatic potential.

Majeed S Shaik1, Steven Y Liem, Paul L A Popelier.   

Abstract

We build on previous work [S. Y. Liem and P. L. A. Popelier, J. Chem. Theory Comput. 4, 353 (2008)], where for the first time, a high-rank multipolar electrostatic potential was used in molecular dynamics simulations of liquid water at a wide range of pressures and temperatures, and using a multipolar Ewald summation. Water is represented as a rigid body, with atomic multipole moments defined by quantum chemical topology partitioning its gas phase electron density. The effect of the level of theory on the local structure of liquid water is systematically addressed. Values for Lennard-Jones (LJ) parameters are optimized, for both oxygen and hydrogen atoms, against bulk properties. The best LJ parameters were then used in a set of simulations at 30 different temperatures (1 atm) and another set at 11 different pressures (at 298 K). Inclusion of the hydrogen LJ parameters significantly increases the self-diffusion coefficient. The behavior of bulk properties was studied and the local water structure analyzed by both radial and spatial distribution functions. Comparisons with familiar point-charge potentials, such as TIP3P, TIP4P, TIP5P, and simple point charge, show the benefits of multipole moments.

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Year:  2010        PMID: 20459171     DOI: 10.1063/1.3409563

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  12 in total

1.  The proton momentum distribution in strongly H-bonded phases of water: a critical test of electrostatic models.

Authors:  C J Burnham; T Hayashi; R L Napoleon; T Keyes; S Mukamel; G F Reiter
Journal:  J Chem Phys       Date:  2011-10-14       Impact factor: 3.488

Review 2.  Force field development phase II: Relaxation of physics-based criteria… or inclusion of more rigorous physics into the representation of molecular energetics.

Authors:  A T Hagler
Journal:  J Comput Aided Mol Des       Date:  2018-11-30       Impact factor: 3.686

Review 3.  Biomolecular force fields: where have we been, where are we now, where do we need to go and how do we get there?

Authors:  Pnina Dauber-Osguthorpe; A T Hagler
Journal:  J Comput Aided Mol Des       Date:  2018-11-30       Impact factor: 3.686

4.  Incorporation of local structure into kriging models for the prediction of atomistic properties in the water decamer.

Authors:  Stuart J Davie; Nicodemo Di Pasquale; Paul L A Popelier
Journal:  J Comput Chem       Date:  2016-08-18       Impact factor: 3.376

5.  Geometry Optimization with Machine Trained Topological Atoms.

Authors:  François Zielinski; Peter I Maxwell; Timothy L Fletcher; Stuart J Davie; Nicodemo Di Pasquale; Salvatore Cardamone; Matthew J L Mills; Paul L A Popelier
Journal:  Sci Rep       Date:  2017-10-09       Impact factor: 4.379

6.  Mechanistic insights into the deleterious roles of Nasu-Hakola disease associated TREM2 variants.

Authors:  Raju Dash; Ho Jin Choi; Il Soo Moon
Journal:  Sci Rep       Date:  2020-02-27       Impact factor: 4.379

7.  Revealing water's secrets: deuterium depleted water.

Authors:  Vladyslav V Goncharuk; Alina A Kavitskaya; Iryna Yu Romanyukina; Oleksandr A Loboda
Journal:  Chem Cent J       Date:  2013-06-17       Impact factor: 4.215

Review 8.  Modeling Molecular Interactions in Water: From Pairwise to Many-Body Potential Energy Functions.

Authors:  Gerardo Andrés Cisneros; Kjartan Thor Wikfeldt; Lars Ojamäe; Jibao Lu; Yao Xu; Hedieh Torabifard; Albert P Bartók; Gábor Csányi; Valeria Molinero; Francesco Paesani
Journal:  Chem Rev       Date:  2016-05-17       Impact factor: 60.622

9.  A FFLUX Water Model: Flexible, Polarizable and with a Multipolar Description of Electrostatics.

Authors:  Zak E Hughes; Emmanuel Ren; Joseph C R Thacker; Benjamin C B Symons; Arnaldo F Silva; Paul L A Popelier
Journal:  J Comput Chem       Date:  2019-11-20       Impact factor: 3.376

10.  Structural and Dynamic Characterizations Highlight the Deleterious Role of SULT1A1 R213H Polymorphism in Substrate Binding.

Authors:  Raju Dash; Md Chayan Ali; Nayan Dash; Md Abul Kalam Azad; S M Zahid Hosen; Md Abdul Hannan; Il Soo Moon
Journal:  Int J Mol Sci       Date:  2019-12-11       Impact factor: 5.923

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