Literature DB >> 20457876

A genetic model for the female sterility barrier between Asian and African cultivated rice species.

Andrea Garavito1, Romain Guyot, Jaime Lozano, Frédérick Gavory, Sylvie Samain, Olivier Panaud, Joe Tohme, Alain Ghesquière, Mathias Lorieux.   

Abstract

S(1) is the most important locus acting as a reproductive barrier between Oryza sativa and O. glaberrima. It is a complex locus, with factors that may affect male and female fertility separately. Recently, the component causing the allelic elimination of pollen was fine mapped. However, the position and nature of the component causing female sterility remains unknown. To fine map the factor of the S(1) locus affecting female fertility, we developed a mapping approach based on the evaluation of the degree of female transmission ratio distortion (fTRD) of markers. Through implementing this methodology in four O. sativa x O. glaberrima crosses, the female component of the S(1) locus was mapped into a 27.8-kb (O. sativa) and 50.3-kb (O. glaberrima) region included within the interval bearing the male component of the locus. Moreover, evidence of additional factors interacting with S(1) was also found. In light of the available data, a model where incompatibilities in epistatic interactions between S(1) and the additional factors are the cause of the female sterility barrier between O. sativa and O. glaberrima was developed to explain the female sterility and the TRD mediated by S(1). According to our model, the recombination ratio and allelic combinations between these factors would determine the final allelic frequencies observed for a given cross.

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Year:  2010        PMID: 20457876      PMCID: PMC2927767          DOI: 10.1534/genetics.110.116772

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  70 in total

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Authors:  T Dobzhansky
Journal:  Genetics       Date:  1936-03       Impact factor: 4.562

2.  Maximum-likelihood models for mapping genetic markers showing segregation distortion. 1. Backcross populations.

Authors:  M Lorieux; B Goffinet; X Perrier; D G de León; C Lanaud
Journal:  Theor Appl Genet       Date:  1995-01       Impact factor: 5.699

3.  Transmission ratio distortion in intraspecific hybrids of Mimulus guttatus: implications for genomic divergence.

Authors:  Megan C Hall; John H Willis
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

4.  Incompatibility of nuclear and mitochondrial genomes causes hybrid sterility between two yeast species.

Authors:  Hsin-Yi Lee; Jui-Yu Chou; Liplee Cheong; Nai-Hsin Chang; Shi-Yow Yang; Jun-Yi Leu
Journal:  Cell       Date:  2008-12-12       Impact factor: 41.582

5.  Genetic mapping of species boundaries in Louisiana irises using IRRE retrotransposon display markers.

Authors:  Amy Bouck; Ryan Peeler; Michael L Arnold; Susan R Wessler
Journal:  Genetics       Date:  2005-08-03       Impact factor: 4.562

6.  Linkage mapping of Hsa-1(Og), a resistance gene of African rice to the cyst nematode, Heterodera sacchari.

Authors:  M Lorieux; G Reversat; S X Garcia Diaz; C Denance; N Jouvenet; Y Orieux; N Bourger; A Pando-Bahuon; A Ghesquière
Journal:  Theor Appl Genet       Date:  2003-04-30       Impact factor: 5.699

7.  Identification and fine mapping of S-d, a new locus conferring the partial pollen sterility of intersubspecific F1 hybrids in rice (Oryza sativa L.).

Authors:  Wentao Li; Ruizhen Zeng; Zemin Zhang; Xiaohua Ding; Guiquan Zhang
Journal:  Theor Appl Genet       Date:  2008-02-15       Impact factor: 5.699

8.  A gene block causing cross-incompatibility hidden in wild and cultivated rice.

Authors:  Kazuki Matsubara; Yoshio Sano
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

9.  Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locus.

Authors:  Daniel A Barbash; Philip Awadalla; Aaron M Tarone
Journal:  PLoS Biol       Date:  2004-06-15       Impact factor: 8.029

10.  Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza.

Authors:  HyeRan Kim; Bonnie Hurwitz; Yeisoo Yu; Kristi Collura; Navdeep Gill; Phillip SanMiguel; James C Mullikin; Christopher Maher; William Nelson; Marina Wissotski; Michele Braidotti; David Kudrna; José Luis Goicoechea; Lincoln Stein; Doreen Ware; Scott A Jackson; Carol Soderlund; Rod A Wing
Journal:  Genome Biol       Date:  2008-02-28       Impact factor: 13.583

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  16 in total

1.  Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses.

Authors:  Kazuki Matsubara; Kaworu Ebana; Tatsumi Mizubayashi; Sachie Itoh; Tsuyu Ando; Yasunori Nonoue; Nozomi Ono; Taeko Shibaya; Eri Ogiso; Kiyosumi Hori; Shuichi Fukuoka; Masahiro Yano
Journal:  Mol Genet Genomics       Date:  2011-09-15       Impact factor: 3.291

2.  An extensive analysis of the African rice genetic diversity through a global genotyping.

Authors:  Julie Orjuela; François Sabot; Sophie Chéron; Yves Vigouroux; Hélène Adam; Harold Chrestin; Kayode Sanni; Mathias Lorieux; Alain Ghesquière
Journal:  Theor Appl Genet       Date:  2014-08-15       Impact factor: 5.699

3.  Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice.

Authors:  Yohei Koide; Atsushi Ogino; Takanori Yoshikawa; Yuki Kitashima; Nozomi Saito; Yoshitaka Kanaoka; Kazumitsu Onishi; Yoshihiro Yoshitake; Takuji Tsukiyama; Hiroki Saito; Masayoshi Teraishi; Yoshiyuki Yamagata; Aiko Uemura; Hiroki Takagi; Yoriko Hayashi; Tomoko Abe; Yoshimichi Fukuta; Yutaka Okumoto; Akira Kanazawa
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-14       Impact factor: 11.205

4.  Genetic analysis of a hybrid sterility gene that causes both pollen and embryo sac sterility in hybrids between Oryza sativa L. and Oryza longistaminata.

Authors:  H Chen; Z Zhao; L Liu; W Kong; Y Lin; S You; W Bai; Y Xiao; H Zheng; L Jiang; J Li; J Zhou; D Tao; J Wan
Journal:  Heredity (Edinb)       Date:  2017-06-28       Impact factor: 3.821

5.  Fine mapping of S37, a locus responsible for pollen and embryo sac sterility in hybrids between Oryza sativa L. and O. glaberrima Steud.

Authors:  Yumin Shen; Zhigang Zhao; Hongyang Ma; Xiaofeng Bian; Yang Yu; Xiaowen Yu; Haiyuan Chen; Linglong Liu; Wenwei Zhang; Ling Jiang; Jiawu Zhou; Dayun Tao; Jianmin Wan
Journal:  Plant Cell Rep       Date:  2015-07-14       Impact factor: 4.570

6.  Genomic Conflicts that Cause Pollen Mortality and Raise Reproductive Barriers in Arabidopsis thaliana.

Authors:  Matthieu Simon; Stéphanie Durand; Natacha Pluta; Nicolas Gobron; Lucy Botran; Anthony Ricou; Christine Camilleri; Françoise Budar
Journal:  Genetics       Date:  2016-05-06       Impact factor: 4.562

7.  Genetic mapping of sterile genes with epistasis in backcross designs.

Authors:  S Xie; J Chen; B Walsh
Journal:  Heredity (Edinb)       Date:  2013-10-09       Impact factor: 3.821

8.  Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations.

Authors:  Jennifer Spindel; Mark Wright; Charles Chen; Joshua Cobb; Joseph Gage; Sandra Harrington; Mathias Lorieux; Nourollah Ahmadi; Susan McCouch
Journal:  Theor Appl Genet       Date:  2013-08-06       Impact factor: 5.699

9.  Patterns of sequence divergence and evolution of the S orthologous regions between Asian and African cultivated rice species.

Authors:  Romain Guyot; Andrea Garavito; Frédérick Gavory; Sylvie Samain; Joe Tohme; Alain Ghesquière; Mathias Lorieux
Journal:  PLoS One       Date:  2011-03-10       Impact factor: 3.240

10.  Fine mapping of RYMV3: a new resistance gene to Rice yellow mottle virus from Oryza glaberrima.

Authors:  Hélène Pidon; Alain Ghesquière; Sophie Chéron; Souley Issaka; Eugénie Hébrard; François Sabot; Olufisayo Kolade; Drissa Silué; Laurence Albar
Journal:  Theor Appl Genet       Date:  2017-01-31       Impact factor: 5.699

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