Literature DB >> 20455947

The mitochondrial genome of the wood-degrading basidiomycete Trametes cingulata.

Sajeet Haridas1, J Stephen Gantt.   

Abstract

We present the 91,500 bp mitochondrial genome of the wood-degrading basidiomycete Trametes cingulata and compare it with the mitochondrial genomes of five additional Basidiomycota species. The Trametes mitochondrial genome encodes 15 proteins, 25 tRNAs and the small and large rRNAs. All of the genes, except one tRNA, are found on the same DNA strand. Several additional ORFs have also been identified; however, their sequences have not been conserved across the species we compared and they show no similarity to any known gene, suggesting that they may not correspond to authentic genes. The presence of endonuclease-like sequences in introns suggests a mechanism that explains the diversity of mitochondrial genome sizes that are unrelated to the gene content.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20455947     DOI: 10.1111/j.1574-6968.2010.01979.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  17 in total

1.  Mitochondrial genome of the basidiomycetous yeast Jaminaea angkorensis.

Authors:  Eva Hegedusova; Brona Brejova; Lubomir Tomaska; Matthias Sipiczki; Jozef Nosek
Journal:  Curr Genet       Date:  2013-09-27       Impact factor: 3.886

2.  The Agaricus bisporus cox1 gene: the longest mitochondrial gene and the largest reservoir of mitochondrial group i introns.

Authors:  Cyril Férandon; Serge Moukha; Philippe Callac; Jean-Pierre Benedetto; Michel Castroviejo; Gérard Barroso
Journal:  PLoS One       Date:  2010-11-18       Impact factor: 3.240

3.  Complete mitochondrial genome of the medicinal mushroom Ganoderma lucidum.

Authors:  Jianqin Li; Jianhui Zhang; Haimei Chen; Xiangdong Chen; Jin Lan; Chang Liu
Journal:  PLoS One       Date:  2013-08-26       Impact factor: 3.240

4.  Comparing COI and ITS as DNA barcode markers for mushrooms and allies (Agaricomycotina).

Authors:  Bryn T M Dentinger; Maryna Y Didukh; Jean-Marc Moncalvo
Journal:  PLoS One       Date:  2011-09-22       Impact factor: 3.240

5.  Evidence for inter-specific recombination among the mitochondrial genomes of Fusarium species in the Gibberella fujikuroi complex.

Authors:  Gerda Fourie; Nicolaas A van der Merwe; Brenda D Wingfield; Mesfin Bogale; Bettina Tudzynski; Michael J Wingfield; Emma T Steenkamp
Journal:  BMC Genomics       Date:  2013-09-08       Impact factor: 3.969

6.  Whole genome and global gene expression analyses of the model mushroom Flammulina velutipes reveal a high capacity for lignocellulose degradation.

Authors:  Young-Jin Park; Jeong Hun Baek; Seonwook Lee; Changhoon Kim; Hwanseok Rhee; Hyungtae Kim; Jeong-Sun Seo; Hae-Ran Park; Dae-Eun Yoon; Jae-Young Nam; Hong-Il Kim; Jong-Guk Kim; Hyeokjun Yoon; Hee-Wan Kang; Jae-Yong Cho; Eun-Sung Song; Gi-Ho Sung; Young-Bok Yoo; Chang-Soo Lee; Byoung-Moo Lee; Won-Sik Kong
Journal:  PLoS One       Date:  2014-04-08       Impact factor: 3.240

7.  High variability of mitochondrial gene order among fungi.

Authors:  Gabriela Aguileta; Damien M de Vienne; Oliver N Ross; Michael E Hood; Tatiana Giraud; Elsa Petit; Toni Gabaldón
Journal:  Genome Biol Evol       Date:  2014-02       Impact factor: 3.416

8.  Complete mitochondrial genome of the aluminum-tolerant fungus Rhodotorula taiwanensis RS1 and comparative analysis of Basidiomycota mitochondrial genomes.

Authors:  Xue Qiang Zhao; Tomoko Aizawa; Jessica Schneider; Chao Wang; Ren Fang Shen; Michio Sunairi
Journal:  Microbiologyopen       Date:  2013-02-21       Impact factor: 3.139

9.  The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera.

Authors:  Sajeet Haridas; Ye Wang; Lynette Lim; Sepideh Massoumi Alamouti; Shaun Jackman; Rod Docking; Gordon Robertson; Inanc Birol; Jörg Bohlmann; Colette Breuil
Journal:  BMC Genomics       Date:  2013-06-02       Impact factor: 3.969

10.  Mitochondrial genome of Phlebia radiata is the second largest (156 kbp) among fungi and features signs of genome flexibility and recent recombination events.

Authors:  Heikki Salavirta; Ilona Oksanen; Jaana Kuuskeri; Miia Mäkelä; Pia Laine; Lars Paulin; Taina Lundell
Journal:  PLoS One       Date:  2014-05-13       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.