Literature DB >> 20453865

A photoconvertible reporter of the ubiquitin-proteasome system in vivo.

Geert Hamer1, Olli Matilainen, Carina I Holmberg.   

Abstract

The ubiquitin-proteasome system (UPS) orchestrates many cellular and tissue-specific processes by degrading damaged and key regulatory proteins. To enable investigation of UPS activity in different cell types in a living animal, we developed a photoconvertible fluorescent UPS reporter system for live imaging and quantification of protein degradation in Caenorhabditis elegans. Our reporter consists of the photoconvertible fluorescent protein Dendra2 targeted for proteasomal degradation by fusion to the UbG76V mutant form of ubiquitin. In contrast to previous reporters, this system permits quantification of UPS activity independently of protein synthesis. Our reporter revealed that UPS-mediated protein degradation varies in a cell type-specific and age-dependent manner in C. elegans.

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Year:  2010        PMID: 20453865     DOI: 10.1038/nmeth.1460

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  35 in total

1.  Short-lived green fluorescent proteins for quantifying ubiquitin/proteasome-dependent proteolysis in living cells.

Authors:  N P Dantuma; K Lindsten; R Glas; M Jellne; M G Masucci
Journal:  Nat Biotechnol       Date:  2000-05       Impact factor: 54.908

2.  Inefficient degradation of truncated polyglutamine proteins by the proteasome.

Authors:  Carina I Holmberg; Kristine E Staniszewski; Kwame N Mensah; Andreas Matouschek; Richard I Morimoto
Journal:  EMBO J       Date:  2004-10-07       Impact factor: 11.598

Review 3.  A proteasome for all occasions.

Authors:  John Hanna; Daniel Finley
Journal:  FEBS Lett       Date:  2007-03-30       Impact factor: 4.124

Review 4.  Aging and regulated protein degradation: who has the UPPer hand?

Authors:  Vita A Vernace; Thomas Schmidt-Glenewinkel; Maria E Figueiredo-Pereira
Journal:  Aging Cell       Date:  2007-08-06       Impact factor: 9.304

5.  RLE-1, an E3 ubiquitin ligase, regulates C. elegans aging by catalyzing DAF-16 polyubiquitination.

Authors:  Wensheng Li; Beixue Gao; Sang-Myeong Lee; Karen Bennett; Deyu Fang
Journal:  Dev Cell       Date:  2007-02       Impact factor: 12.270

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  A transgenic mouse model of the ubiquitin/proteasome system.

Authors:  Kristina Lindsten; Victoria Menéndez-Benito; Maria G Masucci; Nico P Dantuma
Journal:  Nat Biotechnol       Date:  2003-07-20       Impact factor: 54.908

8.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

9.  Polyglutamine proteins at the pathogenic threshold display neuron-specific aggregation in a pan-neuronal Caenorhabditis elegans model.

Authors:  Heather R Brignull; Finola E Moore; Stephanie J Tang; Richard I Morimoto
Journal:  J Neurosci       Date:  2006-07-19       Impact factor: 6.709

10.  Ubiquitin as a degradation signal.

Authors:  E S Johnson; B Bartel; W Seufert; A Varshavsky
Journal:  EMBO J       Date:  1992-02       Impact factor: 11.598

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  49 in total

1.  Analyzing the homeostasis of signaling proteins by a combination of Western blot and fluorescence correlation spectroscopy.

Authors:  Yi-Da Chung; Michael D Sinzinger; Petra Bovee-Geurts; Marina Krause; Sip Dinkla; Irma Joosten; Werner J Koopman; Merel J W Adjobo-Hermans; Roland Brock
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Glycation-altered proteolysis as a pathobiologic mechanism that links dietary glycemic index, aging, and age-related disease (in nondiabetics).

Authors:  Tomoaki Uchiki; Karen A Weikel; Wangwang Jiao; Fu Shang; Andrea Caceres; Dorota Pawlak; James T Handa; Michael Brownlee; Ram Nagaraj; Allen Taylor
Journal:  Aging Cell       Date:  2011-11-15       Impact factor: 9.304

Review 3.  Protein degradation and memory formation.

Authors:  Diasynou Fioravante; John H Byrne
Journal:  Brain Res Bull       Date:  2010-11-13       Impact factor: 4.077

4.  A screenable in vivo assay to study proteostasis networks in Caenorhabditis elegans.

Authors:  Alexandra Segref; Serena Torres; Thorsten Hoppe
Journal:  Genetics       Date:  2011-02-01       Impact factor: 4.562

5.  Using Caenorhabditis elegans as a model system to study protein homeostasis in a multicellular organism.

Authors:  Ido Karady; Anna Frumkin; Shiran Dror; Netta Shemesh; Nadav Shai; Anat Ben-Zvi
Journal:  J Vis Exp       Date:  2013-12-18       Impact factor: 1.355

Review 6.  Aging as an event of proteostasis collapse.

Authors:  Rebecca C Taylor; Andrew Dillin
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-05-01       Impact factor: 10.005

7.  New insights into old worm proteomes.

Authors:  Stephanie M Zimmerman; Stuart K Kim
Journal:  Worm       Date:  2016-05-04

Review 8.  Visualizing ubiquitination in mammalian cells.

Authors:  Sjoerd Jl van Wijk; Simone Fulda; Ivan Dikic; Mike Heilemann
Journal:  EMBO Rep       Date:  2019-01-21       Impact factor: 8.807

9.  EGF signalling activates the ubiquitin proteasome system to modulate C. elegans lifespan.

Authors:  Gang Liu; Jason Rogers; Coleen T Murphy; Christopher Rongo
Journal:  EMBO J       Date:  2011-06-14       Impact factor: 11.598

10.  Life and destruction: ubiquitin-mediated proteolysis in aging and longevity.

Authors:  Thorsten Hoppe
Journal:  F1000 Biol Rep       Date:  2010-11-11
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